Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0350 ATGGAGGTCTGTGAAATTTATTCTGAAGCTGAAGGTTCATCGTTTTCGGATGATTTGGAAGAAGATCCTGATTTCGACATAACCGAAGAAACCTATGCCAAGTTTTCCAACCTCTCAATTGAAAAGAACAAGCCTAAGATGAGTGTTATTAATGATTCGCGAACGGAGATTGATCCAGAAGAGCAGAAGGCTGAACTCCATCTTGATGAGAATGATGAGGAAAGTTTTGTGAAAGTACAAAAAATCATAGAAGGTGATGCATGCACTGGCGATGTTGTTCTGTTCGAGCAAAATGTTTATGAAATGTTCAGCGTAGTATCTAGGAGTGCCATTGGTCCACCTTGTGGCAAAAGGATTGTTGCAGGCCGTATAGTGAAGGAAAGCTATGGTGCTGCAAAGCAGCAGCATACATTTACGGTTGAAGACTTTGAGACAGGTTCCTGTTTTGCCAGCATTTCTTCCTTTTGCCATTCGTTGATTGCTCCTTGTCCATTTGAATTGATGAGTCAATGCCTTTACTTTCAGAGGTGGGAAGATGAAGGAAAAAGGCAGCAAATTTTGATGGAAAAACACTCCAGGGGAATTGTTGCAAGGGCCAGCAGAGAAGCAAGGATACAAGAAAAGGAGAAGAGGAAAGGAATTAGGGAAAACAGGGCATCCCAAAAGGAGCTATCTAGTAACCAATCTCAATCACATCCACTCATGACGAAGTCACATTATCAACATGAGAAATTTAGATGCATCAATCCAGCAAAGCCCAATACTGAGAATCACACTATGACAAACAGATTTGCAGAATGGCCTTACCATAGAAATTCTTTGACTAGCTCAAGTTACTTTCTTCCGTTGGCCCTAAACAAAGAATCCTTTAAGCAAAAGCAACCTTGCAAGTATTATGACCAAGGGAGATGTCGTTTTGGAGACAACTGCAAATTTTTACATGGTGTGAAATCATACCCTCAACATTTTGAAGAGAAACTCAATACTACTAAGAATTACCCTTGCAATGCTATGCCAAACAGGGTTGCAGAATGGTCTTATCAACATCAAGAATCTAGATGCATCAATCCAGACCAAGGTGTAAGAGTTGCCACAAGGCCTCCTCATTTCAAAGGAAACCTCATCAGTACTGAGGATCACCCTTGCCACGCTATGACAAACGGGTTTGCAGAATGGCCTTACCAGAGAAAACATTTGACTAGCTCAAATTACTTGCCTCCATTGGCCCTAACAAAGAATCCTTTAAGCAAAAACAACCTTGCAAGTATTATGACCAAGGGAGATGTCGTTTTGGAGACAACTGCAGATTTTTACATGGTGTGA 1323 0.4104 MEVCEIYSEAEGSSFSDDLEEDPDFDITEETYAKFSNLSIEKNKPKMSVINDSRTEIDPEEQKAELHLDENDEESFVKVQKIIEGDACTGDVVLFEQNVYEMFSVVSRSAIGPPCGKRIVAGRIVKESYGAAKQQHTFTVEDFETGSCFASISSFCHSLIAPCPFELMSQCLYFQRWEDEGKRQQILMEKHSRGIVARASREARIQEKEKRKGIRENRASQKELSSNQSQSHPLMTKSHYQHEKFRCINPAKPNTENHTMTNRFAEWPYHRNSLTSSSYFLPLALNKESFKQKQPCKYYDQGRCRFGDNCKFLHGVKSYPQHFEEKLNTTKNYPCNAMPNRVAEWSYQHQESRCINPDQGVRVATRPPHFKGNLISTEDHPCHAMTNGFAEWPYQRKHLTSSNYLPPLALTKNPLSKNNLASIMTKGDVVLETTADFYMV 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0350 440 MobiDBLite consensus disorder prediction 199 219 - -
Mibi04g0350 440 MobiDBLite consensus disorder prediction 199 236 - -
Mibi04g0350 440 Gene3D - 246 325 - -
Mibi04g0350 440 ProSiteProfiles Zinc finger C3H1-type profile. 290 317 IPR000571 GO:0046872
Mibi04g0350 440 MobiDBLite consensus disorder prediction 220 236 - -
Mibi04g0350 440 PANTHER SAP DOMAIN-CONTAINING PROTEIN 175 259 - -
Mibi04g0350 440 SMART c3hfinal6 291 316 IPR000571 GO:0046872
Mibi04g0350 440 Pfam CCCH-type zinc finger 295 315 IPR041367 -
Mibi04g0350 440 SUPERFAMILY CCCH zinc finger 291 315 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0350 Mibi-ChrMibi04 6116475 6120567 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mibi04g0350 zf-CCCH_4 7.1e-08 CL0537