Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0345 ATGGCTGAATTCTCCTTTGAAACTGACTACAACTCCTCATTAAGCCAACACTATCCCACACATCGCTTTCCTTCAACCCCACTTCCTTCTCGCAACACGTCTCGCTCTTTCACGGCGGCGGCGGCAAGTTCTCGGGGAAATCGCAGTCATGGAATTGGTCGCCGGAACAGAGCTCCGACGATCACCGACGATGACGAAGACCGTTCATGGCAAAGTGAAGTATCATGGCAATTTGAGCCCAATGGGCTGAGAGATTATGGCAGTACAAACTTGGGCTCAATTTTCATTCCTTGGGCCTCAAGCCCAACCCAATCGGGTCGGAGTCGGGTTTTTGACCGATCCGCTAAAGACTATTACCTTTCAAGAACAAGTGGTTTGTTCAGAGGAAATCGTTTTACTTCAAACTCAGATTCAGAAGCTTCTGGCTATGTTGTTCCTCGTACTGGTAGAGTTGAACTTCAAAGCTTTGTTGCTAATGATGATAATGGTGATCAATATAGTAAGTCTTATAGTGGGTTTTCAAGATTGGGTGTTATCAAAGAAGGAAATTTTAATACTAGAAATGGGAAAAATAGTCCATTGGCTGAAGAAGATGAACTTAGTTTCACATCTTTTAGTGTTGGTCATGATGGTTATAGTGGTAATGGGCAGATAGTGCCTGTGCATTTTAGCCATGATGGGGTTGGTAAGTTTTCTGGGTTTGGGGAAGATGGTGTGGAGGAGGATGAGGATGGTATGGATTATTATGATGATGAAGATTTGGATCCTCCAAAAGCTGTTGGGTTGTTTAGCTTGTTTAGGTATTCTACGAAGTGGGATTTGGTGCTTGTGTTTTTGGGTTGCTTGGGGGCTCTTATCAATGGAGGTTCACTTCCTTGGTATTCTTTTCTTTTTGGACAAGTGGTTAATAAGATTTCTGAACAAGCTAAAGATGGTGCTAACAAAGACCAGATAATGAAGGACATAGAGATGATATGCATATATATGAGTATGTTAGCTGCAGTGGTGATGGTTGGAGCATATATGGAGATCACATGTTGGAGGTTGGTAGGAGAGCGATCTGCCCAAAGAATAAGAAGAGAATATCTAAGAGCAGTTCTTCGTCAGGACATTAGCTTTTATGATACAGAGATCAACACTGCTGATATTATGCATGGGATTGCAAGTGATGTTGCACAAATTCAAGAAGTTATGGGAGATAAGATGGCTCACTTCATTCATCATCTATTCACATTCATAACTGGGTATGTAGTTGGGTTTGTAAGGTCATGGAAAATTGCCCTGGTTGTCCTCTCAGTCACCCCAGCGACCATGTTCTGTGGCATAGCTTACAAGGGCATTTATGGTGGTTTATCTGCAAAAGAGGAAGCTTCTTATAGAATGGCTGGTAGCATTGCAGAGCAGGCCATCAGTTCAATTAGGACAGTTTTTTCTTTTGTTGCTGAAAGCCAGATGGCTACAAAATATTTTGAACTGCTGAAAAATTCAGTCCCAGTTGGGGTCAAAATTGGTTTTGCCAAGGGTGCAGGCATGGGGGTGATCTATTTAGTAACATACTCAACATGGGCCTTGGCTTTCTGGTATGGCTCTATCTTAATTGCCAAGGGAGAGATTGATGGAGGCCAGGCCATTGCCTGTTTCTTTGGAGTTATGGTAGGGGGAAGAGGCTTGGCATTGGCGCTTTCATATTTTGCGCAGTTTGCACAAGGCATTGTTGCTGCAAGCCGAGTATTTGAAATCATAGAGAGGGTCCCTGAGATTGATCCCTACAGCCCTGAGGGAAGGAGGCTCTCTAATGTTCGTGGAAGGATTGAGTTCAAGAGTGTTGCCTTTGCATATCCAGCTCGTCCTGATGCTCTAATCCTTAACTCCCTTAAACTTGTTATTCCTTCTTCAAGAACTACAGCACTGGTTGGTGCCAGTGGAGGGGGCAAGTCCACCATTTTTGCTCTAGTAGAGAGGTTTTATGACCCTATTGAAGGGATAATAACCTTAGATGGTCATGATTTGAGGACACTACAAGTGAAGTGGCTAAGAGATCAAATAGGAATGGTGGGTCAGGAACCGATTCTTTTTGCCACAACCATTCTGGAAAATGTGATGATGGGGAAGGACAATGCCACCAAGAAAGAAGCAATTGCTGCTTGCATTGTGGCTGATGCCCACAACTTCATCTCTGCCCTCCCCCTAGGTTATGACACTCAGGTTGGAGCTAAGGGGACCCAACTCTCAGGGGGTCAAAAGCAGCGAATTGCATTGGCCCGAGCCATTATCAAAGATCCTAAAATCCTTCTATTGGATGAACCTACCAGTGCTCTTGATGCTGAGTCAGAATCTGTGGTCCAACAGGCTATTGACAAGATTTCTGCTGGAAGAACAACCATTGTCATTGCTCACAGGATAGCTACAGTAAAGAATGCACATACTATTGTGGTTCTTGAAAATGGATCTGTGACTGAGATCGGTGATCATCGACAGCTTATGGGAAAGGCAGGTGCCTACTATAACCTTGTCATGCTTGCTACGGAAGCTACATCAAAACCAGTATCTAACAGCACACAAAAGGTCAATGACTTTTCTGTCTATGAGAGCTCAGTTTTTGATGTATCAAGATCAGGAAATGCTGTGGATATCTCAAGGTTCAAGTACTTAAAATCCATTCAAGATGAAAAACAAGCCGATATGGAAGATGAGCTACAGAAGAAGCCAAGAAGTTACCAACTTTCTGAGATATGGAAACTGCAAAAACCAGAGTTTCTGACACTGTTTTCAGGATTTGTTCTGGGTATGTTTGCTGGTGCTTTTCTCTCCATTTTCCCATTCATTTTAGGCCTAGCCCTTGAAGTATACTTCAAACAAGACACTAAAACAATGAAAAAAGATATCAACCATCTATGTTTAGTACTGGTTGGGCTAGGATTTGGTTGCATAATCTCTCTGACAGGTCAGCAAGGTTTATGTGGCTGGGCTGGAACTAAACTCACAATCAGGATTAGAGACCTTCTTTTTCGATCCATACTAAAACAGGAACCTGGGTGGTTTGATTTTGAAGAAAACTCCACTGGAGTGCTAGTGTCAAGGCTATCCATTGACTGTATTAGTTTTCGATCAGTGCTTGGTGATCGATTTTCTGTACTCCTGATGGGGCTGAGTGCAGCTGCTGTTGGGCTTGGCGTGTGCTTCAAATTTGATTATAGAATAACTTTGTTGGCTGCTGCACTAACTCCTTTCACCCTTGGTGCAAACTATCTAAACTTGATTGTCAACCTTGGACCACGAGTCAACAATGATTCCTTTGCCAGAGCCAGTAACATTGCTTCTGGTGCAGTCTCAAACATAAGAACAACCATTGCATTTTCTGCACAAGAACAGATGGTCAAATCCTTTGACCGAGCTTTATCAGAACCCAGGAAAAAATCAATAAAAAGATCACAGATTCTTGGTTTAATGCTTGGGTTCTTTGAAGGGGCCATGTATGGAGCATACACATTAACTCTTTGGTTTGGTGCCCTACTTGTAAAACAAGGCAAAGCACAATTCGGGGATGTGTACAAGATTTTTCTCATCCTTGTTTTGAGCTCATTTTCTGTGGGACAACTAGCTGGTTTAGCACCAGATACTTCTTTGGCAGCTACAGCGATTCCAGCTGTTCTAGATATCATACACCGTATGCCATTGATAGGGAGTGATAAAATGAAAGGTAAGAAACCAGAAAGATCTAAGCTATTGAAGCTAGAGTTCAAAATGGTGACTTTTGCGTACCCATCAAGGCCTAATGTGATAGTGTTAAGGAATTTCAATTTGAAGGTCAAAGGTGGAAGCAAGGTTGCCTTAGTAGGGGCAAGTGGTTCAGGAAAATCAACAGTCATATGGTTGATACAGAGGTTCTATGATCCAAACCAGGGGCAGGTGATGATGGGTGGGTTGGATTTGAGGGACATGGATGTGAAGTGGTTGAGGAGACAAACCGCTTTGGTGGGTCAAGAACCTGCACTGTTTGCTGGGAGTATAAGGGAGAATATTGCCTTTGGAGACCCAACAGCTTCTTGGGCTGAAATTGAAGTGGCAGCAAAGGAAGCTTACATTCACAAATTCATTAGTAGCCTTCCTCAAGGTTATGAAACTCAGGTTGGTGAGAGTGGGGTGCAGCTATCAGGTGGCCAAAAACAGAGGTTAGCAATTGCGAGGGCCATATTGAAGAAATCAAGGGTGCTACTTCTTGATGAAGCAAGTAGTGCCTTGGACTTGGAATCAGAGAAGCATGTCCAAGAAGCACTGAAGAATGTTACAAGAGATGCAACAACCATAATAGTAGCCCACCGTCTTTCTACGATCAGAGATGCCAATAGCATAGCGGTGGTGAGAGAAGGGACGGTAGTTGAATTTGGAAGCCATGATACTCTCCTTGCTTCCCATCCCAATGGTTTGTATGCTAGCTTGGTTCGTTCTGAAACTGAAGCCAATGCCTTTACTGGGTTTCAGTAA 4485 0.4323 MAEFSFETDYNSSLSQHYPTHRFPSTPLPSRNTSRSFTAAAASSRGNRSHGIGRRNRAPTITDDDEDRSWQSEVSWQFEPNGLRDYGSTNLGSIFIPWASSPTQSGRSRVFDRSAKDYYLSRTSGLFRGNRFTSNSDSEASGYVVPRTGRVELQSFVANDDNGDQYSKSYSGFSRLGVIKEGNFNTRNGKNSPLAEEDELSFTSFSVGHDGYSGNGQIVPVHFSHDGVGKFSGFGEDGVEEDEDGMDYYDDEDLDPPKAVGLFSLFRYSTKWDLVLVFLGCLGALINGGSLPWYSFLFGQVVNKISEQAKDGANKDQIMKDIEMICIYMSMLAAVVMVGAYMEITCWRLVGERSAQRIRREYLRAVLRQDISFYDTEINTADIMHGIASDVAQIQEVMGDKMAHFIHHLFTFITGYVVGFVRSWKIALVVLSVTPATMFCGIAYKGIYGGLSAKEEASYRMAGSIAEQAISSIRTVFSFVAESQMATKYFELLKNSVPVGVKIGFAKGAGMGVIYLVTYSTWALAFWYGSILIAKGEIDGGQAIACFFGVMVGGRGLALALSYFAQFAQGIVAASRVFEIIERVPEIDPYSPEGRRLSNVRGRIEFKSVAFAYPARPDALILNSLKLVIPSSRTTALVGASGGGKSTIFALVERFYDPIEGIITLDGHDLRTLQVKWLRDQIGMVGQEPILFATTILENVMMGKDNATKKEAIAACIVADAHNFISALPLGYDTQVGAKGTQLSGGQKQRIALARAIIKDPKILLLDEPTSALDAESESVVQQAIDKISAGRTTIVIAHRIATVKNAHTIVVLENGSVTEIGDHRQLMGKAGAYYNLVMLATEATSKPVSNSTQKVNDFSVYESSVFDVSRSGNAVDISRFKYLKSIQDEKQADMEDELQKKPRSYQLSEIWKLQKPEFLTLFSGFVLGMFAGAFLSIFPFILGLALEVYFKQDTKTMKKDINHLCLVLVGLGFGCIISLTGQQGLCGWAGTKLTIRIRDLLFRSILKQEPGWFDFEENSTGVLVSRLSIDCISFRSVLGDRFSVLLMGLSAAAVGLGVCFKFDYRITLLAAALTPFTLGANYLNLIVNLGPRVNNDSFARASNIASGAVSNIRTTIAFSAQEQMVKSFDRALSEPRKKSIKRSQILGLMLGFFEGAMYGAYTLTLWFGALLVKQGKAQFGDVYKIFLILVLSSFSVGQLAGLAPDTSLAATAIPAVLDIIHRMPLIGSDKMKGKKPERSKLLKLEFKMVTFAYPSRPNVIVLRNFNLKVKGGSKVALVGASGSGKSTVIWLIQRFYDPNQGQVMMGGLDLRDMDVKWLRRQTALVGQEPALFAGSIRENIAFGDPTASWAEIEVAAKEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRLAIARAILKKSRVLLLDEASSALDLESEKHVQEALKNVTRDATTIIVAHRLSTIRDANSIAVVREGTVVEFGSHDTLLASHPNGLYASLVRSETEANAFTGFQ 1494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0345 1494 CDD ABC_MTABC3_MDL1_MDL2 604 841 - -
Mibi04g0345 1494 CDD ABC_MTABC3_MDL1_MDL2 1246 1482 - -
Mibi04g0345 1494 MobiDBLite consensus disorder prediction 13 45 - -
Mibi04g0345 1494 ProSitePatterns ABC transporters family signature. 743 757 IPR017871 GO:0005524|GO:0016887
Mibi04g0345 1494 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 604 840 IPR003439 GO:0005524
Mibi04g0345 1494 CDD ABC_6TM_Pgp_ABCB1_D2_like 912 1227 - -
Mibi04g0345 1494 Pfam ABC transporter 1263 1411 IPR003439 GO:0005524
Mibi04g0345 1494 MobiDBLite consensus disorder prediction 57 71 - -
Mibi04g0345 1494 FunFam ABC transporter B family member 1 594 842 - -
Mibi04g0345 1494 SUPERFAMILY ABC transporter transmembrane region 264 589 IPR036640 GO:0005524|GO:0016020
Mibi04g0345 1494 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1243 1482 IPR027417 -
Mibi04g0345 1494 FunFam ATP-binding cassette transporter, subfamily B, member 2, group MDR/PGP protein PpABCB2 1096 1236 - -
Mibi04g0345 1494 SUPERFAMILY ABC transporter transmembrane region 911 1225 IPR036640 GO:0005524|GO:0016020
Mibi04g0345 1494 Gene3D - 602 855 IPR027417 -
Mibi04g0345 1494 Gene3D - 1243 1485 IPR027417 -
Mibi04g0345 1494 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 278 569 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi04g0345 1494 SMART AAA_5 631 832 IPR003593 -
Mibi04g0345 1494 SMART AAA_5 1272 1464 IPR003593 -
Mibi04g0345 1494 FunFam ABC transporter B family member 1 1234 1485 - -
Mibi04g0345 1494 ProSitePatterns ABC transporters family signature. 1384 1398 IPR017871 GO:0005524|GO:0016887
Mibi04g0345 1494 CDD ABC_6TM_Pgp_ABCB1_D1_like 278 577 - -
Mibi04g0345 1494 Gene3D ABC transporter type 1, transmembrane domain 327 1087 IPR036640 GO:0005524|GO:0016020
Mibi04g0345 1494 PANTHER ABC TRANSPORTER B FAMILY 251 840 - -
Mibi04g0345 1494 MobiDBLite consensus disorder prediction 13 71 - -
Mibi04g0345 1494 Pfam ABC transporter 622 771 IPR003439 GO:0005524
Mibi04g0345 1494 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 595 839 IPR027417 -
Mibi04g0345 1494 Pfam ABC transporter transmembrane region 923 1193 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi04g0345 1494 Pfam ABC transporter transmembrane region 277 553 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi04g0345 1494 Gene3D ABC transporter type 1, transmembrane domain 1095 1241 IPR036640 GO:0005524|GO:0016020
Mibi04g0345 1494 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1245 1481 IPR003439 GO:0005524
Mibi04g0345 1494 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 925 1209 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0345 Mibi-ChrMibi04 6051278 6058939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0345 937 1488 Calmodulin-binding Proteins AT2G36910 36.155 7.86e-99 345