Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0326 ATGTGTGGAGGTGCTATTATCTCCGACTTCATTCAGACACCTGAGGCCAGGTCTCGCCGCCTCACCGCCGATTTTCTCTGGCCGAATTTGAAGAAACCCAGTTTGGGGAAGCGATCATTGAAGCCTTCTAGATCTGCATTTGGGGATTCAGATGATGATTTTGAAGCTGATTTTAGGGAATTCAAGGATGAGTCTGATATCGATGAGGTCGATGTGGATGATGATTTGGTGTTCGATTTCAATACCTTAGGTTTCTCTGCTGCTAAACCCCCCAAGCCTTTTAGATCCCTTTCTCGTGGATCTGGCGCTGTAAAATCATTGAAATTCAATGTAAAAGCTGACAAGTCTGAGAAAAGAAAGAGGAAGAATCTGTATAGGGGAATTCGTCAGCGTCCATGGGGAAAATGGGCAGCTGAGATCCGTGACCCAAGGAAAGGAGTCCGTGTCTGGCTTGGAACCTTCAACACTGCTGAAGAAGCAGCTAGGGCCTATGATGCTGAAGCAAGGAGGATTCGTGGTAAGAAAGCCAAAGTGAATTTTCCCTGTGAGGCCTCCAGCTCTTCCCCAAAACGTTACAATGTAAAACGCTCTGTCCAGCCCATTATGAATCAGAAATTCAATTTTGGAAGCAATCCAAAGGACTACTTCTGTCCTACAGGTCTGATTGAGCAGAAACCACTGGTTAATCAGTATGCTAACGTGGGAGGCTTACCCAGTAGTGCAGATGGGCTCACATCATTCACACCATTGAATGATGTTAATGTCCCTGTTTGTTTCAGTTCGGATCAAGCGAGTAATTCGTTTGATTATTCTAGTATTGGCTGGGGTGAACAGGGCCCAAAGACTCCTGACATCTCATCGATGCTTTCTGCTTCTATAGCAGGTGAATTTCAAGCTGTTAATGAGGCTAGCCAGAACAATAACATTCCTAACACTCAGGGTGTGTTGTCTGTGGAAAATGATTCTGCAAAGACACTGTCTGAGGAATTTGCAGATATTGAATCCCAGTTGCGATTCTTTCAGACACCTTTCCTTGAAGGGAGCTGGGACGATGCTTCATTAGAAACCTTGCTTGGTGAAAACTCAACTCAGGATGGTGGTGAGAACCCAATGGACTTTTGGAGCTTTGATGATATACCTTCCATGGCCGGGGGAAGTTACATGAATGTTGTTCATCTTTGTTGGAGATTGAGTAGAGAGAAAACCGACCCTTTTAAGCATGTCTGGATGGCTATTATCTGGATGCTGGCGGAAAAGTAA 1260 0.4492 MCGGAIISDFIQTPEARSRRLTADFLWPNLKKPSLGKRSLKPSRSAFGDSDDDFEADFREFKDESDIDEVDVDDDLVFDFNTLGFSAAKPPKPFRSLSRGSGAVKSLKFNVKADKSEKRKRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPCEASSSSPKRYNVKRSVQPIMNQKFNFGSNPKDYFCPTGLIEQKPLVNQYANVGGLPSSADGLTSFTPLNDVNVPVCFSSDQASNSFDYSSIGWGEQGPKTPDISSMLSASIAGEFQAVNEASQNNNIPNTQGVLSVENDSAKTLSEEFADIESQLRFFQTPFLEGSWDDASLETLLGENSTQDGGENPMDFWSFDDIPSMAGGSYMNVVHLCWRLSREKTDPFKHVWMAIIWMLAEK 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0326 419 ProSiteProfiles AP2/ERF domain profile. 124 181 IPR001471 GO:0003700|GO:0006355
Mibi04g0326 419 Pfam AP2 domain 125 173 IPR001471 GO:0003700|GO:0006355
Mibi04g0326 419 SUPERFAMILY DNA-binding domain 124 182 IPR016177 GO:0003677
Mibi04g0326 419 CDD AP2 125 181 IPR001471 GO:0003700|GO:0006355
Mibi04g0326 419 FunFam Ethylene-responsive transcription factor 2 123 183 - -
Mibi04g0326 419 PRINTS Ethylene responsive element binding protein signature 125 136 IPR001471 GO:0003700|GO:0006355
Mibi04g0326 419 PRINTS Ethylene responsive element binding protein signature 147 163 IPR001471 GO:0003700|GO:0006355
Mibi04g0326 419 PANTHER DNA-BINDING DOMAIN 105 284 IPR044808 GO:0003700|GO:0009873
Mibi04g0326 419 SMART rav1_2 124 187 IPR001471 GO:0003700|GO:0006355
Mibi04g0326 419 Gene3D AP2/ERF domain 124 183 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0326 Mibi-ChrMibi04 5745308 5748321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0326 1 387 AP2-EREBP Transcription Factor Family AT1G53910 45.316 4.10e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi04g0326 AP2 1.8e-12 CL0081