Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0322 ATGATGTTTCATCCTGGAGGGATTCCTAAGCAGACTTGTACTCTACTTGCTGTCACATGTGGCAAAAATGTTGAGCTTGAGTTCGACAAGAAACTCACTCAGAATCAGCTCAAATATCCTTTTCCTGAGTTAACTTCGTCAGGGCGTTTGGAGGTTCAAACTCTAAACAATCCAGAAAAAGAACAGTTTAGGAAAGTTCTCGAGTCTTATCAACCAAATTTTGTATATTTACAAGGTGAACAGCTTGCAAATGGTGAAGTTGGTTCTTTGGTCTGGCATGGTGAAGAATTGGCCACCTCTGACGCTATATCGGAGCTCTTTGGTCCCACATTGCCGACGGCTGTATACTTGGAAATCCCGAATGGGGAAAATTTGGCAGAAACTCTTCATCTTAAGGGTGTTGCATATGTGATTTATTGGAGAAGTACTTTTGCTTGTTATGCTGCCTGCCATTTTCGTCAAGCATTCCTTTCAGTGGTGCAGAGCTCTTCTACGCATACATGGGATGCCTTTCACCTTGCGCGTGCTTCTTTTGATTTTTATTGTGTTCAAAACAATCAAGTCCTTCCTGGCGAGAAACATGATTCTAGTGAAAATATAGGGCCACACCTTCTTGGAGATTGTCTTCAAATCAATATTGATCCTCCTGAGGTGTGTGAAGATGATGAGGAAAGTTCCTCAGGCAGTCTTCCTGCTATAAAAATACATGATGATGAAGTGAACTTGAGATTTCTCATCTGTGGTTCACCTTCCATTGTGGATGAGTCACTATTGGGATCTTTGGAGGATGGTCTCAAAGCACTCTTAACCATTGAAACACGGGGGAGCAAACTCCATGGCAAATTTAGTGCTCCCCCACCACCTCTTCAAGCAGCCACTTTTTCTCGAGGAGTTGTGACCATGCGATGTGATATTTCAACCTGTAGTTCAGCCCATATCTCTCTTCTGGTGTCTGGTAGTGCTCAGACTTGCTTTAGTGATCAGTTATTGGAGAATCATATTAAAAACGAGATAATTGAGAACAGTCAACTAGTTCGTGCCCAAATTGATGAGGGAAACAAACAGCAAGTCTCTGAACCTCGTAGATCTGCCTCAATTGCTTGTGGAGCAGCTGTATTTGAAGTTTGCTTGAAGCTTCCTCTATGGGCTTCGCAGGTATTGAGACAGCTAGCTCCTGAAATTACTTATCGAAGTTTAGTTGCTCTTGGGATTGCTAGCATTCAAGGGTTGCCTATTGCTTCTTTCGAGAAAGATGATGCTGACCGCCTGCTTTTCTTTTATCAAAGTCAAGAGAGAGATAGTGATGCAGACAAAGTCATTTTCAGCAGCCCCCCTGGTTGGTTGAAACCACCCCCTCCTACTAGGAAAAGGTGTGAGCCAAGTCAAGAGGCAAGCCCTGGCTTTCAAGATGGTGTTTTAACTGGCCAAGGTACTATTCAAAAAGTAGATGAAGAGGAAAAGGATACAAAAATGGTGAATGGAATTGGCACATCCTTAACTCCAGCTAGGCAGAGATTAAAAGTGTCTGCAATGAGACCCATCCCTCATGTTCATCGCCATAGAATGACGCTCTTTTCTGGACCTTTTGAGACAGATAATTATGATGGTGCCCAAGTTGAAGCTAGTTTACCGCTTGTTGTCCCTGCAAAGCGCAGTACTACTGGTTCAAGTTCTGCAACACAGAGAAGGTCATTTTCAGCCTCAGCAGCGTCTAAGCAGATTATTTCCTTGAACCCACTGCCCTTGAAAAAACATGGTTGTGGCAGAGGCCAGATCCAAGCTTGCTCTGAGGAGGAATTTTTGAAAGATGTCATGGAGTTTCTAATGCTTCGAGGACATAGTCGATTGATTCCTCAAGGAGGGCTTGCTGAGTTTCCTGATGCCATACTCAATGGAAAAAGACTTGATCTCTACAACTTGTATAAAGAGGTGGTTACCAGGGGAGGATTCCATGTTGGTAATGGCATCAATTGGAAAGGACAAATCTTCTCCAAGATGCGCAATTACACAACCACCAATAGGATGACTGGCGTTGGAAATACACTCAAAAGGCATTATGAAACTTACCTTTTAGAATATGAATTAGCACATGAGGATGTGGATGGAGAGTGCTGCTTGTTGTGCCACAGTAGTGCAGCCGGGGATTGGGTGAATTGCGGCATATGTGGAGAGTGGGCCCACTTTGGCTGTGACAGACGGCAAGGTCTTGGTGCATTTAAGGATTATGCAAAGACAGATGGACTAGAATATATCTGTCCTCATTGTAGCGTAACTAATTTCAAGAAGAAACCCTCAGGTGTTGTTACTAATGGGTTTTCTCAGGGGTCAATGGCGTCAAAAACCCTTTGA 2349 0.4347 MMFHPGGIPKQTCTLLAVTCGKNVELEFDKKLTQNQLKYPFPELTSSGRLEVQTLNNPEKEQFRKVLESYQPNFVYLQGEQLANGEVGSLVWHGEELATSDAISELFGPTLPTAVYLEIPNGENLAETLHLKGVAYVIYWRSTFACYAACHFRQAFLSVVQSSSTHTWDAFHLARASFDFYCVQNNQVLPGEKHDSSENIGPHLLGDCLQINIDPPEVCEDDEESSSGSLPAIKIHDDEVNLRFLICGSPSIVDESLLGSLEDGLKALLTIETRGSKLHGKFSAPPPPLQAATFSRGVVTMRCDISTCSSAHISLLVSGSAQTCFSDQLLENHIKNEIIENSQLVRAQIDEGNKQQVSEPRRSASIACGAAVFEVCLKLPLWASQVLRQLAPEITYRSLVALGIASIQGLPIASFEKDDADRLLFFYQSQERDSDADKVIFSSPPGWLKPPPPTRKRCEPSQEASPGFQDGVLTGQGTIQKVDEEEKDTKMVNGIGTSLTPARQRLKVSAMRPIPHVHRHRMTLFSGPFETDNYDGAQVEASLPLVVPAKRSTTGSSSATQRRSFSASAASKQIISLNPLPLKKHGCGRGQIQACSEEEFLKDVMEFLMLRGHSRLIPQGGLAEFPDAILNGKRLDLYNLYKEVVTRGGFHVGNGINWKGQIFSKMRNYTTTNRMTGVGNTLKRHYETYLLEYELAHEDVDGECCLLCHSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGLEYICPHCSVTNFKKKPSGVVTNGFSQGSMASKTL 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0322 782 CDD ARID 596 694 - -
Mibi04g0322 782 CDD PHD_ARID4_like 704 755 - -
Mibi04g0322 782 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 8 777 IPR042293 -
Mibi04g0322 782 SUPERFAMILY ARID-like 594 709 IPR036431 GO:0003677
Mibi04g0322 782 Pfam ARID/BRIGHT DNA binding domain 597 694 IPR001606 GO:0003677
Mibi04g0322 782 SMART ARID_2 591 694 - -
Mibi04g0322 782 SUPERFAMILY FYVE/PHD zinc finger 691 758 IPR011011 -
Mibi04g0322 782 SMART bright_3 595 699 IPR001606 GO:0003677
Mibi04g0322 782 ProSiteProfiles ARID domain profile. 594 698 IPR001606 GO:0003677
Mibi04g0322 782 Gene3D - 591 697 IPR036431 GO:0003677
Mibi04g0322 782 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 698 761 IPR013083 -
Mibi04g0322 782 MobiDBLite consensus disorder prediction 442 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0322 Mibi-ChrMibi04 5674723 5682653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0322 2 772 ARID Transcription Factor Family AT3G43240 59.355 0.0 928
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mibi04g0322 ARID 1.5e-14 CL0123