Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0316 ATGGATTCAATCAAATCCTTCAAAGGCTACGGCAAAGTAGACGCACTCGAACAAAGGAATTTCCAGAAGAAAACCCGCCGCCGCCTCATCATCGTCGGAATCTCCATCCTCATCCTCGCCGCCGTCGTCATCGCCGCCTTCACCGCCACCGTCATCCGCAAACACAACAAATCCTCCTCCTCCTCCGATAACACCATTCCTCCCACTCAATTAACCCCAGCCTCCTCCCTCAAAGCCGTATGCGCCACCACACAATACCCTAACTCCTGCCTCTCAAGCATCTCCTCATTACCTAATTCCAACACCACAGATCCTGAACTCCTCTTCAAGCTCTCTCTCCAAATCGCACTCAACGAACTCTCCAATCTCTCAAATCTCCCTTCGAAATTGAAGTCCAATGTGAACGATCCACGGATCCAGAAGGCGATCGATGTTTGCGGAATCGTGTTTGATGATGCAGTGGATCGACTCAACGAGTCGATTTCTTCAATTACAGGTGGAAATGGCGGAGGGAAGATCCTCACGAAATCGAAGATCAGCGATGTTGAGACTTGGTTGAGCTCTGCGATTACGTATCAGGAGACGTGTCTGGATGCAATTAGGGAGGTGAATTCGAGTTCAGCGAGTGAGATTGTTCGAGATCTGGAAATTTCGATGAAGAATTCAACGGAATTCGTGAGTAATAGTTTGGCGATTGTTACGAAGGTGTTAGGGCTTCTCTCGAATCTGAACATTCCGATCCATGGGAGGAGGCTGCTTGGATTTGATGAGTCTGGTTTTCCGGCGTGGGTTACGGCGGCGGAGAGGAGGTTGTTGTTGTCGTCGGAGGACAAGAACTCTTCGACGGCGGCGGCGACGGTGGTGGTGGCGAAGGATGGGAGTGGGCAGTATACGACGGTGAAGGCGGCGTTGGCGGGTGTGAAGAAGAAGAGTTTAACGAGGCAAGTGATACATGTGAAGGAAGGTGTTTATGAGGAGAATATAGATTTGGATAAGAACACATGGAATGTGATGATTGTTGGTGATAGTAAGACGAAGACTATTATCTCTGGTGGATTGAACTTCGTCGACGGCACTCCTACTTTCTCCACTGCAACTTTCGCCGTCAAGGGAAAGGGATTCATCGCCAAAGACATAGGATTCAGAAACACCGCCGGAGCAGCGAAGCACCAGGCAGTGGCATTCCGATCAGGCTCCGACCAATCAGTGTTCTACAGGTGTTCTTTCGACGGATACCAAGACACACTCTATGCCCACTCCAACCGTCAATTCTACAGAGAATGTGACATCACTGGCACCATCGACTTCATATTTGGAAACTCCGCTGTTGTCTTCCAAAACTGCAACATCATACCAAGACAACCATTGCCAAACCAATTCAACACCATCACAGCTCAAGGCAAAACTGATCCTAACCAGAACACTGGCATTATCATCCAGAAATCATCCTTAACCGCCGCCGCCAACCTCACCGCCGCCACGTACCTTGGTCGGCCGTGGAAGCCGTACTCCACCACCGTTATCATGCAGTCGGATATCGGGTCATTCTTGAACCCGGTGGGTTGGATTGAGTGGGTTTCAGGTGTGGAGCCTGCAAGCACCATATTCTATGCAGAGTATAGGAATACAGGGGACGGGTCGGGTGTGGATAAGCGGGTCAAATGGGCGGGTTATCGGTCGGGTTTATCGGATGATGAGGCGGGGAAGTTCACTGTTCAGTCATTTATACAAGGGAGTGATTGGTTATCAAACACTGATGTGGAGTTTGAATCCACGTTATAA 1782 0.4978 MDSIKSFKGYGKVDALEQRNFQKKTRRRLIIVGISILILAAVVIAAFTATVIRKHNKSSSSSDNTIPPTQLTPASSLKAVCATTQYPNSCLSSISSLPNSNTTDPELLFKLSLQIALNELSNLSNLPSKLKSNVNDPRIQKAIDVCGIVFDDAVDRLNESISSITGGNGGGKILTKSKISDVETWLSSAITYQETCLDAIREVNSSSASEIVRDLEISMKNSTEFVSNSLAIVTKVLGLLSNLNIPIHGRRLLGFDESGFPAWVTAAERRLLLSSEDKNSSTAAATVVVAKDGSGQYTTVKAALAGVKKKSLTRQVIHVKEGVYEENIDLDKNTWNVMIVGDSKTKTIISGGLNFVDGTPTFSTATFAVKGKGFIAKDIGFRNTAGAAKHQAVAFRSGSDQSVFYRCSFDGYQDTLYAHSNRQFYRECDITGTIDFIFGNSAVVFQNCNIIPRQPLPNQFNTITAQGKTDPNQNTGIIIQKSSLTAAANLTAATYLGRPWKPYSTTVIMQSDIGSFLNPVGWIEWVSGVEPASTIFYAEYRNTGDGSGVDKRVKWAGYRSGLSDDEAGKFTVQSFIQGSDWLSNTDVEFESTL 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0316 593 FunFam Pectinesterase 280 593 - -
Mibi04g0316 593 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 76 236 IPR035513 -
Mibi04g0316 593 ProSitePatterns Pectinesterase signature 2. 430 439 IPR033131 -
Mibi04g0316 593 TIGRFAM PME_inhib: pectinesterase inhibitor domain 65 235 IPR006501 GO:0004857
Mibi04g0316 593 FunFam Pectinesterase 73 237 - -
Mibi04g0316 593 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 236 IPR035513 -
Mibi04g0316 593 Pfam Plant invertase/pectin methylesterase inhibitor 76 232 IPR006501 GO:0004857
Mibi04g0316 593 Pfam Pectinesterase 287 578 IPR000070 GO:0030599|GO:0042545
Mibi04g0316 593 CDD PMEI-like_3 79 235 - -
Mibi04g0316 593 SUPERFAMILY Pectin lyase-like 281 590 IPR011050 -
Mibi04g0316 593 Gene3D - 280 593 IPR012334 -
Mibi04g0316 593 PANTHER PECTINESTERASE 38 583 - -
Mibi04g0316 593 SMART PMEI_2 72 232 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0316 Mibi-ChrMibi04 5630492 5634053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0316 1 587 Carbohydrate Esterase AT1G53840 56.639 0.0 657