Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0315 ATGAGCAAATTCCGGCAAGTCCTCGCCGGCGGGATCTCAGATCCCGGCAACAGCAAGAGAAACAAGAACCTCCTCCTCGCCCTCACCTCCACCCTCCTCCTCCTCGCCGCCGTCGCCGGAGTAAATTCCCGCCAAAAATCCCAAAATTCAAATTCCTCCTCCCACGCCATCGTCAAATCCGCCTGCAGCTCAACTCTCTACCCTCAACTCTGCTTCTCCGCCATCACCTCCGAGCCCAAATTCACCGAAAAAATCTCCTCCCACCGTGACGTCATCCAAATCTCCATCAACATCACAATCACAGCCGTCGAGCACAATTTCCTCACCGTCGAGAGGCTAATCCTGAAGCGAAAGAAAAGCCTAACAGAGAGAGAGAAAACCGCTCTCCACGATTGCCTCGAGACGATCGACGAGACTCTCGACGAGCTTCACTCTGCTTCGCTAGATCTGAAAATTTATCCGAACAAGAAATCTCTGTATCAACATGCTGACGATCTGAAAACCCTAATTAGCGCAGCGATCACGAATCAGGTGACGTGTCTCGACGGATTCTCCCACGACGGCGCCGATAAGGAGGTCCGGCGAGACCTGGAGGCAGGGCAGGTACACGTGGAGAGAATGTGCAGCAATGCGCTGGCCATGGTGAAGAACATGACCGACACGGACTTGGCGGAATACGAGATGAAGGGCCGGAGGTTGACGGCGGAATACGAGATGAAGGGCCGGAGGTTGATGGCGGCGGAGGATGGCGGAGGGCGGTGGCCGGAGTGGATGCCGGAGGCGGGGGACGGCGGCGTGAGGTGGCCGGAGTGGGTGACGGCGGCGGACAGGCGGTTGTTGCAGGCGGCGGAGGTGAAGGCGGACGCGGTGGTGGCCGCGGATGGGAGCGGGGATTTTAGGACGGTGACGGAGGCGGTCGCGGCGGCGCCGGAGAAGAGTGCGAAGAGGTATGTGATTAAGATTAAAGCTGGGGTGTATAAGGAGAATGTGGAGGTTGGGAAGAAGAAGATGAATATAATGTTTTTGGGAGATGGGAGGGAGAATACTATCATTACAGGAAGTCGGAACGTTGTTGATGGAAGCACCACTTTCCATTCTGCTACAGTTGCCGTAGTGGGAGAAAAATTCCTAGCCCGCGACATAACATTCCAAAACACGGCGGGCCATGAGAAGCACCAGGCCGTGGCCCTCCGGGTCGGGTCGGACTTCGCGGCCTTCTACCAATGTGACTTCCTTGCGTACCAAGACACCCTCTACGTCCACAACAACCGCCAATTCTTCATCAACTGCCTCATAGCCGGTACCGTTGACTTCATCTTCGGCAACTCAGCCGCCGTCTTCCAAGATTGCGACATCCATGCCCGCCTACCCGGTGCGGGCCAGAAAAACATGGTCACCGCTCAGGGCCGGGTCGACCCGAACCAAAACACTGGCATAGTCATCCAAAAATGCAGAATTGGAGCGACCCAAGATTTGGAATCAAAGAAGAAGGACTTCAAAACCTACCTTGGTAGGCCATGGAAGCAGTATTCAAGAACAGTGATAATGCAGTCAACCATATCGGACATTATTGACCCTGTGGGATGGCATGAGTGGAATGGTGATTTTGCTTTGGACACTTTGTTTTACGGTGAGTATCAGAATTCCGGCGCCGGCGCCGGCACGGCCAATAGGGTGAAGTGGAAGGGGTATAAGGTTATAACAAGTGCTCCTGAGGCTCAGAAGTTTACTGCTGGGAATTTTATTGGTGGGTCTAATTGGTTGAGGTCCACTGGTTTTCCTTTCTCTCTTGGTCTTTAA 1800 0.5433 MSKFRQVLAGGISDPGNSKRNKNLLLALTSTLLLLAAVAGVNSRQKSQNSNSSSHAIVKSACSSTLYPQLCFSAITSEPKFTEKISSHRDVIQISINITITAVEHNFLTVERLILKRKKSLTEREKTALHDCLETIDETLDELHSASLDLKIYPNKKSLYQHADDLKTLISAAITNQVTCLDGFSHDGADKEVRRDLEAGQVHVERMCSNALAMVKNMTDTDLAEYEMKGRRLTAEYEMKGRRLMAAEDGGGRWPEWMPEAGDGGVRWPEWVTAADRRLLQAAEVKADAVVAADGSGDFRTVTEAVAAAPEKSAKRYVIKIKAGVYKENVEVGKKKMNIMFLGDGRENTIITGSRNVVDGSTTFHSATVAVVGEKFLARDITFQNTAGHEKHQAVALRVGSDFAAFYQCDFLAYQDTLYVHNNRQFFINCLIAGTVDFIFGNSAAVFQDCDIHARLPGAGQKNMVTAQGRVDPNQNTGIVIQKCRIGATQDLESKKKDFKTYLGRPWKQYSRTVIMQSTISDIIDPVGWHEWNGDFALDTLFYGEYQNSGAGAGTANRVKWKGYKVITSAPEAQKFTAGNFIGGSNWLRSTGFPFSLGL 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0315 599 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 219 IPR035513 -
Mibi04g0315 599 Pfam Plant invertase/pectin methylesterase inhibitor 57 214 IPR006501 GO:0004857
Mibi04g0315 599 SMART PMEI_2 53 214 IPR006501 GO:0004857
Mibi04g0315 599 TIGRFAM PME_inhib: pectinesterase inhibitor domain 31 218 IPR006501 GO:0004857
Mibi04g0315 599 ProSitePatterns Pectinesterase signature 2. 432 441 IPR033131 -
Mibi04g0315 599 CDD PMEI-like_3 60 219 - -
Mibi04g0315 599 PANTHER PECTINESTERASE 33 589 - -
Mibi04g0315 599 FunFam Pectinesterase 282 599 - -
Mibi04g0315 599 FunFam Pectinesterase 54 219 - -
Mibi04g0315 599 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 219 IPR035513 -
Mibi04g0315 599 Gene3D - 282 599 IPR012334 -
Mibi04g0315 599 SUPERFAMILY Pectin lyase-like 285 598 IPR011050 -
Mibi04g0315 599 Pfam Pectinesterase 288 584 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0315 Mibi-ChrMibi04 5618414 5625043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0315 17 599 Carbohydrate Esterase AT3G14310 67.458 0.0 794