Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0310 ATGGGTGGCTGGTCTGGAACCGACGGCAACAACTCCGGCGACTCGCCGGGGTTAGAATTAACCGGAAAAATCATGGTCATAGCTATCATATTCCTCTTCTTCGTCATCGTTATCGTCTGTTTCATCCATCTCTACGCCAAATGGTTCTGGTGGGCCATTGAACAAGGCGACACCGCCGCCGCCCAAGGCGGTGCCGGCGGCCGCCGCCGCCGCAGTCGGATTGCCTTCGCTCCGGGACAAGATCCCACCTTTCAAAGGCGTGGACTTGAAGCACAGGTGCTTAGATCTTTGCCTGTATCTGTGTATAGATCAGAGGATTTCAAAGATGGATTGGAATGTGCTGTTTGTCTTAGTGAGGTTGTTGATGGGGAGAAAGCTAGGATATTGCCTAAATGTAATCATGGGTTTCATGTGGAGTGTATTGATATGTGGTTTCATTCCCATTCTACATGTCCTATTTGTAGGAACTTGGTTGGTTCTTCAGAAGAAGCATCTGAATTTAATCACACTTCAGGTGTTAGAGGAGATGCCATAGAGATTTATAGTGAGTCATCAGATTCAGAAAGTTCAGATTCTTCAATTGAGGAAGATTTGGAGTCTGCAAATTTCCCAACAAATGTGTTGGTTTGGGGGAATCAAACCCAAGTGAATTCTGTTGGTGCAGGTCCTTCTGTTCAGGCACCTTCTTCATCATCATCATCATCAGTGGCTGCAGATAGTAGTAGTAACAGCAATAAACGTGATGGGATGTTGGTGATTGACATACCAAGAGAGATGAATCCATTAGCTTTACCCTCTACTAGCAGATGTCCTGAAGATGAATTGAAGTCACCAATGACTTCTAGACTTCAGTCATTCAGAAGGATGCTTAGCATGAAGTTCAGCCCTCGGAGTCCTAGTTCTGTAGATGTGGAACAAGCAGGGAAAGGACTGAGCTAG 939 0.4601 MGGWSGTDGNNSGDSPGLELTGKIMVIAIIFLFFVIVIVCFIHLYAKWFWWAIEQGDTAAAQGGAGGRRRRSRIAFAPGQDPTFQRRGLEAQVLRSLPVSVYRSEDFKDGLECAVCLSEVVDGEKARILPKCNHGFHVECIDMWFHSHSTCPICRNLVGSSEEASEFNHTSGVRGDAIEIYSESSDSESSDSSIEEDLESANFPTNVLVWGNQTQVNSVGAGPSVQAPSSSSSSSVAADSSSNSNKRDGMLVIDIPREMNPLALPSTSRCPEDELKSPMTSRLQSFRRMLSMKFSPRSPSSVDVEQAGKGLS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0310 312 MobiDBLite consensus disorder prediction 259 312 - -
Mibi04g0310 312 SMART ring_2 113 154 IPR001841 -
Mibi04g0310 312 SUPERFAMILY RING/U-box 93 160 - -
Mibi04g0310 312 ProSiteProfiles Zinc finger RING-type profile. 113 155 IPR001841 -
Mibi04g0310 312 MobiDBLite consensus disorder prediction 219 247 - -
Mibi04g0310 312 FunFam RING-H2 finger protein ATL3 80 160 - -
Mibi04g0310 312 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 79 159 IPR013083 -
Mibi04g0310 312 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 18 162 IPR044675 -
Mibi04g0310 312 CDD RING-H2_EL5_like 112 155 - -
Mibi04g0310 312 Pfam Ring finger domain 112 155 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0310 Mibi-ChrMibi04 5562793 5563731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0310 17 291 C3H Transcription Factor Family AT1G53820 41.034 2.92e-66 208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0310 04 5562793 5563731 Mibi04g0310 04 5562793 5563731 ECH