Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi04g0309 | ATGTTCATCCATAATAATGTCATCGTCTTCTCATTACTAACAGCTGCAGCCACCATGTTGATCTTCTTCTTACTCATCAAACGCCTTCTTCTTCATTATCATCATCATCATTCTTCTGCAGCTTCTGATGGAAGTGAATATTATGAATGTGTAGTGTGTTTAAGCCAAGTGAATAAAGGAGATAAGATTAGGTGCTTACCAGTATGCAACCACAGGTTCCATTCTGATTGTATTGCTCTTTGGCTCAAGAATCATTCTACTTGCCCTCTCTGCAGATACATCATAATCACTCCTAATGATCACTCTTTTCTTCGTTGTTATCACAAGTTAATTAAGAGCATTCCCGATTTCTCTCTTTCGGGGTTTTCTTCATTCATTCCTTCAACCTAA | 390 | 0.3769 | MFIHNNVIVFSLLTAAATMLIFFLLIKRLLLHYHHHHSSAASDGSEYYECVVCLSQVNKGDKIRCLPVCNHRFHSDCIALWLKNHSTCPLCRYIIITPNDHSFLRCYHKLIKSIPDFSLSGFSSFIPST | 129 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi04g0309 | 129 | ProSiteProfiles | Zinc finger RING-type profile. | 50 | 92 | IPR001841 | - | |
| Mibi04g0309 | 129 | Pfam | Ring finger domain | 49 | 92 | IPR001841 | - | |
| Mibi04g0309 | 129 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 43 | 96 | IPR044675 | - | |
| Mibi04g0309 | 129 | SUPERFAMILY | RING/U-box | 42 | 98 | - | - | |
| Mibi04g0309 | 129 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 30 | 99 | IPR013083 | - | |
| Mibi04g0309 | 129 | SMART | ring_2 | 50 | 91 | IPR001841 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi04g0309 | 42 | 100 | C3H Transcription Factor Family | AT1G53820 | 52.542 | 3.44e-17 | 73.9 |