Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0293 ATGTTGGAGGATGGAAGGCAGATAGTGCTGTTCATCAGCTTCTGTATTCTGGGTTTCATCCCCATTGCCATCAATGGTGACACGGATCCAAATGATGCTGCTTCTCTAAGGGTATTATTTAGCAGCATGAATTCACCATCCCAGCTAGGTTGGCCTGCAAATGGTGGTGATCCATGTGTACAGCACTGGAAGGGCATTAGTTGCTCCGGCAACCGAGTCACAGACATCAAGTTACCTGGCCTTGCACTAACTGGAACGTTGGGCTACCAGTTACAAACCTTGTCATCTGTGATCAACCTAGACCTGAGTAACAATAACCTTGGAGGCACTATACCATATCAACTTCCTCCAAATGTGCAGCGATTAAACCTTGCTAACAACAACTTCACTGGGGAAGTAGTTTATTCTATTTCTGATATGACTTCTCTTACATACCTAAATCTTGGTCACAATCAACTCCAGGGTGCACTGAGTGTCAACTTTGAAAAGCTTTCTTCACTCTCCACATTGGATCTCTCTTTTAATTCTCTGTCAGGTGACCTTCCTCAGAGTCTCACCTCACTTTCAAGCATCACCACCATGTATCTGCAAAACAACCAGTTTACAGGCACAATTGATGTCCTTGCTGGTCTTCCTCTTGAAACTCTGAATGTGCAAAACAATCACTTTACAGGTTGGATCCCAGAACAGTTGAAAAACATAAACTTACAGAAGGATGGTAATGCATGGAGCTCAAGCCCTGCACCCCCTCCCCCACCTGGGACACCTCCTGCGACTAGAAGCACCCAAACTCACAAAACTGGTGGCAGCAGTGGAAGAAACACCCCATCAGATGCCAGTACCAGTGATAATGATAAGAAATCCGGTATAGGAGGTGGTGCCATTGCAGGAATAGTGATCTCCCTGATAATTGTTGGAGCAATAGTAGCATTCTTTCTGATTAAGAGGAGATCCAGGAAGCCATCTTCAGATGTAGAAAATGTTGACAATCGGCCCTTTGCTCCTCTTGCATCAAATGAAGTGCATGAAATGAAGTCAGTGCAAACATCATCTGTACCTGACACAAAGACATTTGTTCCTTCTGCCTCATTCAATCTCAAACCTCCACCTATTGATCGCCACAAATCATTTGATGAAGACGAATTTTCAAAGAAGCCCGATATTGTAAAGAAAAATGTAACAGCTCCTGCAAATGTAACATTATATTCTATTGCAGATCTACAGATTGCTACTGGCAGCTTCAGTATGGATCATCTTCTTGGCGAGGGATCTTTTGGACGCGTTTACCGGGCTCAATTTGATGATGGGGAGGTTCTTGCCGTGAAGAAGATAGATTCATCTGTCCTTCATAATGATATGTCTGAAGATTTTATTGAAGCCGTTTCAAACATCTCCCAGTTGCACCATCCCAATGTAACAGAGCTCATTGGTTATTGTTCAGAGCATGGACAGCATCTTCTGGTCTATGAGTTTCACAAGAGTGGATCACTGCATGACTTTCTTCACTTGCCAGACGAACATAGCAAACCATTGATATGGAATTCCCGCGTCAAGATTGCTTTGGGAACTGCACGTGCTTTAGAGTACCTGCATGAAGTTTGTTCACCATCAGTTGTTCATAAAGATATTAAATCAACCAACATACTACTAGATACGGAGCTTAATCCTCACCTTTCTGACAGTGGACTGGCAAGCTATATTCCAAATGCCGACCAGGTATTAAACCATAATGCTGGATCAGGATACGAGGCACCTGAAGTTGGCTTGTCTGGTCAGTATAATCTGAAGAGTGATGTCTACAGCTTTGGAGTTGTCATGTTGGAACTTCTTAGTGGACGGAAACCATTTGATAGCTCAAGGCCAAGGTCTGAGCAGTCTCTAGTTCGATGGGCAACTCCACAACTTCATGATATTGATGCATTGACTAAAATGGTTGATCCTGCGCTGGAAGGTCTCTACCCTGTTAAGTCTCTTTCTCGGTTTGCAGATGTTATCGCCCTTTGTGTTCAGCCGGAACCTGAGTTCCGACCACCGATGTCCGAGGTGGTTCAAGCATTGGTCCGATTGGTGCAACGTGCAAACATGAGCAGGCGAACAACGTTTGGATCATCTGAACATGGAGGATCCCAACGAGGAGATAGCTCAGAAGCACAAGAAATGTAA 2163 0.4415 MLEDGRQIVLFISFCILGFIPIAINGDTDPNDAASLRVLFSSMNSPSQLGWPANGGDPCVQHWKGISCSGNRVTDIKLPGLALTGTLGYQLQTLSSVINLDLSNNNLGGTIPYQLPPNVQRLNLANNNFTGEVVYSISDMTSLTYLNLGHNQLQGALSVNFEKLSSLSTLDLSFNSLSGDLPQSLTSLSSITTMYLQNNQFTGTIDVLAGLPLETLNVQNNHFTGWIPEQLKNINLQKDGNAWSSSPAPPPPPGTPPATRSTQTHKTGGSSGRNTPSDASTSDNDKKSGIGGGAIAGIVISLIIVGAIVAFFLIKRRSRKPSSDVENVDNRPFAPLASNEVHEMKSVQTSSVPDTKTFVPSASFNLKPPPIDRHKSFDEDEFSKKPDIVKKNVTAPANVTLYSIADLQIATGSFSMDHLLGEGSFGRVYRAQFDDGEVLAVKKIDSSVLHNDMSEDFIEAVSNISQLHHPNVTELIGYCSEHGQHLLVYEFHKSGSLHDFLHLPDEHSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKDIKSTNILLDTELNPHLSDSGLASYIPNADQVLNHNAGSGYEAPEVGLSGQYNLKSDVYSFGVVMLELLSGRKPFDSSRPRSEQSLVRWATPQLHDIDALTKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSRRTTFGSSEHGGSQRGDSSEAQEM 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0293 720 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 29 254 - -
Mibi04g0293 720 ProSiteProfiles Protein kinase domain profile. 414 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0293 720 PANTHER LEUCINE RICH REPEAT KINASE 2 72 692 - -
Mibi04g0293 720 ProSitePatterns Protein kinases ATP-binding region signature. 420 443 IPR017441 GO:0005524
Mibi04g0293 720 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 492 700 - -
Mibi04g0293 720 Pfam Protein tyrosine and serine/threonine kinase 416 686 IPR001245 GO:0004672|GO:0006468
Mibi04g0293 720 Pfam Leucine rich repeat 117 177 IPR001611 GO:0005515
Mibi04g0293 720 MobiDBLite consensus disorder prediction 259 287 - -
Mibi04g0293 720 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Mibi04g0293 720 SMART serkin_6 414 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0293 720 MobiDBLite consensus disorder prediction 697 720 - -
Mibi04g0293 720 ProSitePatterns Serine/Threonine protein kinases active-site signature. 538 550 IPR008271 GO:0004672|GO:0006468
Mibi04g0293 720 MobiDBLite consensus disorder prediction 239 288 - -
Mibi04g0293 720 Gene3D Transferase(Phosphotransferase) domain 1 493 706 - -
Mibi04g0293 720 Gene3D Phosphorylase Kinase; domain 1 377 491 - -
Mibi04g0293 720 CDD STKc_IRAK 420 689 - -
Mibi04g0293 720 Gene3D Ribonuclease Inhibitor 31 181 IPR032675 -
Mibi04g0293 720 Gene3D Ribonuclease Inhibitor 182 246 IPR032675 -
Mibi04g0293 720 SUPERFAMILY L domain-like 29 233 - -
Mibi04g0293 720 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 378 491 - -
Mibi04g0293 720 PRINTS Leucine-rich repeat signature 164 177 - -
Mibi04g0293 720 PRINTS Leucine-rich repeat signature 97 110 - -
Mibi04g0293 720 SUPERFAMILY Protein kinase-like (PK-like) 396 686 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0293 Mibi-ChrMibi04 5295691 5302648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0293 2 699 Strubbelig Receptor Gene Family AT1G53730 67.139 0.0 887
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Mibi04g0293 PK_Tyr_Ser-Thr 4e-43 CL0016