Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0292 ATGGCCCACCTCCTCCATTATCTTCTTCTTCCTCTTCCTCCTCCCATTCTCATTTTCTCACACTCCTCTTGTTCTCACTGCCACACTCTGCCTCTAACCTCTTTCACTGAAGAAGGAGCTCAAGGAGAAGTTCTCTTCTGGGTTCTCTTACTTTCCCTCCAAGGACTGGATAAGCCTTTGCTTGACCCTGAGAATTTCAGTCGAGAAGGTGTTGATTTGGAACGCATACCATTGGAAGAAGTTTTTGAGCAGCTAAAAACAACGCCAAGAGGACTTTCATCTGATGATGCTGAAGCCAGACTCCAAATATTTGGCCAAAATAAGCTTGAAGAGAAGCCTGAAAATAAAATATTGAAGTTCCTGAGTTTCATGTGGAACCCTCTATCATGGGTTATGGAAGCAGCTGCTATTATGGCAATTGCTCTTGCTAATGGTGGAGGGGAGGGTCCTGATTGGCAGGATTTTGTAGGGATCATATGCTTACTGATAATAAATTCCACCATTAGTTTTATTGAAGAGAATAATGCTGGAAATGCAGCAGCCGCACTGATGGCTCATTTAGCTCCAAAAACGAAGGTTCTGAGAGACGGGCAGTGGCAAGAGCAAGATGCAGCTATTTTAGTACCTGGGGATATAGTCAGCATAAAGCTGGGAGATATCATTCCAGCTGATGCTCGCCTTCTTGAAGGAGACCCCCTAAAAATTGACCAGTCGGCTCTCACTGGAGAATCCTTGCCAGTAACCAAGAAGACAGGAGATGAAGTATTTTCTGGCTCAACATGTAAGCATGGAGAAATTGAAGCTGTAGTCATTGCAACAGGAGTTCACACCTTTTTTGGAAAGGCAGCACACTTAGTTGATAGTACTATAGTTGTTGGACATTTTCAAAAGGTCCTAACCGCAATTGGGAACTTCTGCATTTGCTCTATAGCTGTAGGGATGATCATTGAAATCATAGTAATGTATCCTATTGAGAAACGTTCATATAGGGATGGAATCAACAACCTTCTTGTTCTCTTGATTGGAGGAATTCCCATAGCCATGCCAACAGTGCTATCTGTGACACTTGCAATCGGCTCTCATAGACTTTCACAGCAGGGAGCCATCACAAAGAGAATGACAGCAATTGAAGAAATGGCGGGTATGGATGTACTATGCAGTGATAAGACTGGAACTCTTACCCTCAATCGCCTTTCTGTTGACAGAAACCTTATAGAGGTCTTTAATAGCAATATGGACAAAGATATGGTTGTCCTGCTAGCAGCCAGAGCAGCTAGGATGGAAAATCAGGATGCCATTGATGCAGCCATCGTTAATATGCTTGCTGATCCAAGAGAGGCACGTGCAAACATCACTGAAGTTCATTTTCTACCTTTCAATCCAGTAGACAAACGTACTGCTATTACATATTATGATTCTGAAGGCAAATGGTATAGGGCCAGCAAAGGAGCTCCTGAACAGATTCTAAATATGAGCATAGAGAGAGATGAGATTGCCGGGAAAGTCCATTCCATCATTGACAAATATGCTGAAAGGGGCTTGAGATCTCTTGCAGTTGCTTTGCAGGAAGTTCCTGAAAAATCCAAGGACAGTCCTGGAGGTCCTTGGACTTTTTGTGGGTTGCTGCCTTTGTTTGATCCTCCAAGACATGATAGTGCTGAGACTATACGCAGAGCACTTAACCTTGGAGTCAATGTTAAAATGATTACAGGGGATCAGCTGGCAATTGCAAAGGAGACAGGGCGAAGACTTGGTATGGGGACAAATATGTATCCTTCTTCATCATTGTTGGGACGTGATAAGGATGATTACGAAGCCCTCCCAGTAGACGAGCTCATTGAAAAGGCAGATGGCTTTGCTGGTGTATTTCCCGAACACAAGTATGAAATTGTGAAAATTTTACAAGAAAAGAAGCATGTAGTTGGAATGACTGGAGATGGAGTGAATGATGCACCGGCTTTAAAGAAAGCCGACATTGGAATTGCCGTGTCAGATGCAACTGATGCTGCAAGAGGTGCTGCTGATTTGGTCTTAACTGAGCCAGGATTAAGTGTTATTGTCAGTGCTGTGTTAACTAGCCGAGCTATATTTCAAAGAATGAAGAATTATACAATATATGCAGTCTCCATAACCATTCGTATAGTGCTTGGTTTTATGCTTCTGGCATTGATTTGGGAGTATGATTTTCCACCTTTCATGGTCCTGATCATCGCCATATTGAATGATGGGACAATTATGACCATATCAAAAGATCGCGTAAAGCCATCACCAACTCCTGACAGTTGGAAGCTGCCAGAGATATTTGCAACTGGAATAGTAATTGGCACTTACCTCGCTTTGGTTACTGTTCTATTCTACTGGGTAGTAGTGGACACCACTTTCTTTGAGACACACTTCCATGTAGCCTCCTTATCCAGTGACAGTGAGAAAGTTTCGTCTGCTGTGTATCTTCAAGTCAGTATCATCAGCCAGGCTTTGATTTTTGTAACGCGAAGTCAAGGATGGTCATACCTAGAGAGACCTGGAACTCTCTTAATGTGTGCCTTTGTTGTAGCTCAACTGGTGGCCACATTGATAGCTGTGTATGCACATATCAGCTTTGCAGAAATTACAGGCATTGGATGGGGATGGGCTGGTGTTATATGGTTATACAGCTTGATCTTCTATATACCTTTGGACATTATCAAGTTCACAATTCGCTATATTTTGAGTGGTGATGCCTGGAATTTGGTATTTGACAGAAAGACTGCTTTTAGTTCTAAGAAAGACTATGGGAAAGAAGATAGGGCTACACAATGGATTGCCTCTCAGAGAAGTTTACAAGGATTGCAAGGTGCAGACTTAGAGGTGAAGAATGGACTATCAAGAAGACGATCTTCTTCTTTGATTGCTGAACAAGCAAGAAGACGTGCTGAAATCGCTAGGCTGGGAGAATTACACACTTTGAGAGGACATGTAGAGTCAGTTTTGAGACTGAAGAACTTGGACCAGAGTGTTCTTCAATCAGCACACACAGTGTGA 3021 0.4277 MAHLLHYLLLPLPPPILIFSHSSCSHCHTLPLTSFTEEGAQGEVLFWVLLLSLQGLDKPLLDPENFSREGVDLERIPLEEVFEQLKTTPRGLSSDDAEARLQIFGQNKLEEKPENKILKFLSFMWNPLSWVMEAAAIMAIALANGGGEGPDWQDFVGIICLLIINSTISFIEENNAGNAAAALMAHLAPKTKVLRDGQWQEQDAAILVPGDIVSIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKKTGDEVFSGSTCKHGEIEAVVIATGVHTFFGKAAHLVDSTIVVGHFQKVLTAIGNFCICSIAVGMIIEIIVMYPIEKRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLSVDRNLIEVFNSNMDKDMVVLLAARAARMENQDAIDAAIVNMLADPREARANITEVHFLPFNPVDKRTAITYYDSEGKWYRASKGAPEQILNMSIERDEIAGKVHSIIDKYAERGLRSLAVALQEVPEKSKDSPGGPWTFCGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGRDKDDYEALPVDELIEKADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVSDATDAARGAADLVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLPEIFATGIVIGTYLALVTVLFYWVVVDTTFFETHFHVASLSSDSEKVSSAVYLQVSIISQALIFVTRSQGWSYLERPGTLLMCAFVVAQLVATLIAVYAHISFAEITGIGWGWAGVIWLYSLIFYIPLDIIKFTIRYILSGDAWNLVFDRKTAFSSKKDYGKEDRATQWIASQRSLQGLQGADLEVKNGLSRRRSSSLIAEQARRRAEIARLGELHTLRGHVESVLRLKNLDQSVLQSAHTV 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0292 1006 FunFam ATPase 4 plasma membrane-type 634 871 - -
Mibi04g0292 1006 SUPERFAMILY Calcium ATPase, transduction domain A 189 286 IPR008250 -
Mibi04g0292 1006 FunFam Plasma membrane ATPase 398 545 - -
Mibi04g0292 1006 FunFam Plasma membrane ATPase 189 273 - -
Mibi04g0292 1006 Gene3D - 398 545 IPR023299 GO:0000166
Mibi04g0292 1006 PANTHER CALCIUM-TRANSPORTING ATPASE 75 938 - -
Mibi04g0292 1006 CDD P-type_ATPase_H 91 897 IPR006534 GO:0008553|GO:0016020|GO:0120029
Mibi04g0292 1006 Pfam haloacid dehalogenase-like hydrolase 382 658 - -
Mibi04g0292 1006 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 91 862 IPR006534 GO:0008553|GO:0016020|GO:0120029
Mibi04g0292 1006 Gene3D - 151 871 - -
Mibi04g0292 1006 PRINTS P-type cation-transporting ATPase superfamily signature 644 663 - -
Mibi04g0292 1006 PRINTS P-type cation-transporting ATPase superfamily signature 386 400 - -
Mibi04g0292 1006 PRINTS P-type cation-transporting ATPase superfamily signature 667 679 - -
Mibi04g0292 1006 PRINTS P-type cation-transporting ATPase superfamily signature 236 250 - -
Mibi04g0292 1006 PRINTS P-type cation-transporting ATPase superfamily signature 540 551 - -
Mibi04g0292 1006 PRINTS P-type cation-transporting ATPase superfamily signature 562 572 - -
Mibi04g0292 1006 Gene3D - 189 273 - -
Mibi04g0292 1006 Pfam E1-E2 ATPase 187 365 - -
Mibi04g0292 1006 SUPERFAMILY Calcium ATPase, transmembrane domain M 72 903 IPR023298 -
Mibi04g0292 1006 SUPERFAMILY HAD-like 382 691 IPR036412 -
Mibi04g0292 1006 FunFam Plasma membrane ATPase 538 692 - -
Mibi04g0292 1006 ProSitePatterns E1-E2 ATPases phosphorylation site. 388 394 IPR018303 -
Mibi04g0292 1006 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 158 407 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi04g0292 1006 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 619 725 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi04g0292 1006 Pfam Cation transporter/ATPase, N-terminus 76 138 IPR004014 -
Mibi04g0292 1006 SMART Cation_ATPase_N_a_2 72 144 IPR004014 -
Mibi04g0292 1006 SFLD p-type atpase 368 696 IPR044492 -
Mibi04g0292 1006 Gene3D - 958 1006 - -
Mibi04g0292 1006 SFLD C1.7: P-type atpase like 368 696 - -
Mibi04g0292 1006 PRINTS H+-transporting ATPase (proton pump) signature 675 700 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi04g0292 1006 PRINTS H+-transporting ATPase (proton pump) signature 502 520 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi04g0292 1006 PRINTS H+-transporting ATPase (proton pump) signature 816 837 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi04g0292 1006 PRINTS H+-transporting ATPase (proton pump) signature 616 632 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi04g0292 1006 PRINTS H+-transporting ATPase (proton pump) signature 644 660 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi04g0292 1006 Gene3D - 383 681 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0292 Mibi-ChrMibi04 5281573 5289622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0292 54 1006 Primary Pumps ATPases AT1G17260 79.119 0.0 1517