Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0285 ATGGAGGACTCATCAGCTCTTATGCAGCAAAATATGCCGGTGGGATTAAGATTCCAACCAACCGATGAAGAAATCGTCGGTCACTATCTCCGTCACAAATTGTTGGCAGATGATCCTTCCATCTACAACATCATCCCTGAGATTGACCTTTGCAAGTACAAACCATGTAAATTACCAGCGTTTAAGCTGAACAAGTTGGACGACCCAGAATGGTTTTTCTATAGTCCTAAGGACTACAAGTATTGCAATAGCACTCGCTCTAATAGGACAACCTCATGGGGCTACTGGAAAGTCACCGGCAAAGACAGGAACATTAAGGATCGTATTACCAACAATGTTATTGGGACCAAGAAGACTCTTGTTTTCTATCAAGGGTGTCTTCCTGGTACTAAAACCAACTGGGTTATTCATGAATATCATGACGCCCTCTTTTCTCCAAGTCAGAGAACCCATGTTCTATGCAAGTTACTGAAGAAATCAGCTGAGAAGAAAACAAAAGATAACTCGGATGATGATGAGCCCATTTATGATGAAAGTGAGCCAAATGATCTCAGCACTACTGAGAATGAAAATCCAACAAATGGTTACAAAATCCCACAAGTACATTATTTTACATATATGGATCCAATGATGACTCAAACACCTCTAGAGTCAGATGATTTTGGAGGCCCATCAATGATTCAAGCACCTCATGATGTGGATTCAAACATGGAGTCATCCGAAGGATTTGATTTTAGATCATTCTTGCGGTCTTCTCCAAACAGGGATGAACAAGAGTAA 780 0.4077 MEDSSALMQQNMPVGLRFQPTDEEIVGHYLRHKLLADDPSIYNIIPEIDLCKYKPCKLPAFKLNKLDDPEWFFYSPKDYKYCNSTRSNRTTSWGYWKVTGKDRNIKDRITNNVIGTKKTLVFYQGCLPGTKTNWVIHEYHDALFSPSQRTHVLCKLLKKSAEKKTKDNSDDDEPIYDESEPNDLSTTENENPTNGYKIPQVHYFTYMDPMMTQTPLESDDFGGPSMIQAPHDVDSNMESSEGFDFRSFLRSSPNRDEQE 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0285 259 MobiDBLite consensus disorder prediction 214 259 - -
Mibi04g0285 259 ProSiteProfiles NAC domain profile. 12 159 IPR003441 GO:0003677|GO:0006355
Mibi04g0285 259 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 197 - -
Mibi04g0285 259 MobiDBLite consensus disorder prediction 180 196 - -
Mibi04g0285 259 Gene3D NAC domain 21 165 IPR036093 GO:0003677|GO:0006355
Mibi04g0285 259 SUPERFAMILY NAC domain 6 159 IPR036093 GO:0003677|GO:0006355
Mibi04g0285 259 Pfam No apical meristem (NAM) protein 13 140 IPR003441 GO:0003677|GO:0006355
Mibi04g0285 259 MobiDBLite consensus disorder prediction 163 196 - -
Mibi04g0285 259 MobiDBLite consensus disorder prediction 232 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0285 Mibi-ChrMibi04 5195570 5196787 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0285 5 171 NAC Transcription Factor Family AT4G35580 49.133 1.20e-50 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi04g0285 NAM 8.1e-31 No_clan