Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0282 ATGGCGGATCAAGAGATTCATATGCCGGTGGGCTGGAGATTCCATCCCACCGATCAAGAGATCGTCGGCTACTACCTCCGTCACAAACTGATGGCCGATGATCCTTCCATTAACGACATCATCCCTGAGATTGGCGTCTGCAAGTATGAACCTTGGGATTTATTAGATTGGGCTGCTTCAGCGGCTTTGGCAACCAAGTTTGATGAATTTCAATGCTTTTTCTTTAGTCCTTGCGATTATAAGTACTCTAATAGTACTCGGTTTAACCGGACAACCTTGCGTGGCTTCTGGAAAGTCACTGGCATAGACCGGAAAATTAAACAAAGAGGCACCAACAATGTCATTGGGACCAAGAAGACCCTAGTTTTTCACGAACGCAGTGGTAATCGTGGAGTCAAAACCAACTGGGTTATTCATGAATACCATGATCTCATGTTAGCTCCAGCCCAGAAGAACAATGAGAAGAAAACAAAAGAAAAATCTCATCAGGCGTTTGATGAAGCCATAGACTCAATGATTCAAACGCCCCCAAAACCGAATGAAGCCATCGACTCGATGATTCAAACGCCCCCCCAACCAAATGAAGTCATAGACTCAATGATTCAAACGCCCCCCCAACCAAATGAAGCCATAGACTTAATGATTCAAACGCCCCCCCAATCAAATGAAGTCATAGACTCAATGATTCAAACAAATTTCCAATTAACCGAAACCATAGACTCAATGATTCAAACAACTCCTCTATTGAATGAAGTTATAAATTCAATGGTTTATATACCTCCCCAATCAAATGAAACTACAAATTCAACAATTTCACCTCTCCAATCATTTGAAGATATAAGCTCAATGATTCAAACACTTCAACCAAATAAAGCTATAGACCCATTTATTCAAACATCTCATCAATTAAATGAAGATGTAGATTCACAGGTTCAAACACCTTTCGAACCGGATGAAGCTATGATCCCAATTATTCATCCAGCACCGCCTGAGCCAAATTTTACTGTTGAAACAATATATGAGCTCGGGTTGAACTTGTTTGATACAGGTGAACTTGGGTTTAGCTTATTTGACGAAGGTGAATGTGACTTCACCTCACTCTTGCAGCTGTCTCGAAGCATGGATGAGCCGATGCTATTTGAGAATTTGGCAACATCTGATATGAATTATCATGAAGCATAG 1182 0.4103 MADQEIHMPVGWRFHPTDQEIVGYYLRHKLMADDPSINDIIPEIGVCKYEPWDLLDWAASAALATKFDEFQCFFFSPCDYKYSNSTRFNRTTLRGFWKVTGIDRKIKQRGTNNVIGTKKTLVFHERSGNRGVKTNWVIHEYHDLMLAPAQKNNEKKTKEKSHQAFDEAIDSMIQTPPKPNEAIDSMIQTPPQPNEVIDSMIQTPPQPNEAIDLMIQTPPQSNEVIDSMIQTNFQLTETIDSMIQTTPLLNEVINSMVYIPPQSNETTNSTISPLQSFEDISSMIQTLQPNKAIDPFIQTSHQLNEDVDSQVQTPFEPDEAMIPIIHPAPPEPNFTVETIYELGLNLFDTGELGFSLFDEGECDFTSLLQLSRSMDEPMLFENLATSDMNYHEA 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0282 393 ProSiteProfiles NAC domain profile. 8 167 IPR003441 GO:0003677|GO:0006355
Mibi04g0282 393 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 8 164 - -
Mibi04g0282 393 SUPERFAMILY NAC domain 5 144 IPR036093 GO:0003677|GO:0006355
Mibi04g0282 393 Gene3D NAC domain 17 169 IPR036093 GO:0003677|GO:0006355
Mibi04g0282 393 Pfam No apical meristem (NAM) protein 9 142 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0282 Mibi-ChrMibi04 5079315 5081053 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0282 8 142 NAC Transcription Factor Family AT3G49530 49.630 1.28e-38 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi04g0282 NAM 1.6e-29 No_clan