Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0281 ATGGAAGACATCCAAAATATTCTCTCATCTTTCTCGAGGACGCGGTTTGAGCATGTGTCCAAACATATCAGGCCAGTTTCCTCATCTCACTTTACTCTTTCTTGCCCTCTCAGTCCCTTTGAAAGTATTATTATTGCTGAAACAACCATGGAGGATCAAGAGGTTTCTACAGCGGTGGGCTGGAGATTCAAGCCCACCGACCAAGAGATCGTCGGCCACTTCCTCCGACACAAATTGTTGGCCGATGATCCTTCCATTAATCACACCTTACCTGAGATTGGCGTCTGCAAGTATGAACCTTGGGATTTGTTAGATTGGGTTGTTTCAGCGGCTTTGGCAACTAAGTTTGATGAATTTCAATGTTTTTTCTTTAGTCCTTGCGATTATAAGTACTCTAATAGTACTCGGTTTAACCGAACAACCTTGTGTGGCTTCTGGAAAGTCACCGGCGTAGACCGAAAAATTAAACAAAGAGGCACCAACAATGTTATTGGGACCAAGAAAACATTAGTTTTTCACAAACGCTGTGGTAATCGTGGAGTTAAAACCAACTGGGTTATTCATGAATACCATGATCTTGTGTTAGCTCCTGCACAAAGGTCTCATGTTCTTTGTTGGTTAAAGAAAAATAATGAGAAGAAAACAAAAGAAAAAAGTCATCAACCACTTGATGATAAAGGTGACTCAATGATTCAGGCACCTCCCCAACCAGATGGAGCCCTAGACTCAATGATTCAGGCACCTCCGCAACCAGGTGGAGCCGTAGACTCGATGATTCAGGCACCTTCCCAACCAGGTGGAGCCATAGACTCGATGATTCAGGCACCTCCTCAATCAAATGAAATTACATATTCAGTGTTTCCACCTCTCCAATCAATTGAAGTCACAGACTCAATGATTCAAAAACATCTTCAACCAAATGAAGCTGTAAACCCATCTATTGAATTGTCTCAGCAATTGAATGAAGTTGTAGATCCAGTGGTTCAAACACCTTTCAAACCCGACGAAACTGTGATCTCAAATATTCATACAAGACCGCCTGAACTAAATTCTAATGTTGAAGCAATATATGACTCAAGTGAGCTTGGGTACAGCTTATTTGATTCAGTTGAATTTGGGTTTAACTTTGACATAGGTGAATATGATTTCACCTCATTCTTGCAGCCGTCTCCAAGCATGGATGAGCCAGTGCTATTTGAGACTTTGGCAACATCGTAG 1218 0.4179 MEDIQNILSSFSRTRFEHVSKHIRPVSSSHFTLSCPLSPFESIIIAETTMEDQEVSTAVGWRFKPTDQEIVGHFLRHKLLADDPSINHTLPEIGVCKYEPWDLLDWVVSAALATKFDEFQCFFFSPCDYKYSNSTRFNRTTLCGFWKVTGVDRKIKQRGTNNVIGTKKTLVFHKRCGNRGVKTNWVIHEYHDLVLAPAQRSHVLCWLKKNNEKKTKEKSHQPLDDKGDSMIQAPPQPDGALDSMIQAPPQPGGAVDSMIQAPSQPGGAIDSMIQAPPQSNEITYSVFPPLQSIEVTDSMIQKHLQPNEAVNPSIELSQQLNEVVDPVVQTPFKPDETVISNIHTRPPELNSNVEAIYDSSELGYSLFDSVEFGFNFDIGEYDFTSFLQPSPSMDEPVLFETLATS 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0281 405 ProSiteProfiles NAC domain profile. 57 210 IPR003441 GO:0003677|GO:0006355
Mibi04g0281 405 Gene3D NAC domain 66 216 IPR036093 GO:0003677|GO:0006355
Mibi04g0281 405 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 58 221 - -
Mibi04g0281 405 SUPERFAMILY NAC domain 53 208 IPR036093 GO:0003677|GO:0006355
Mibi04g0281 405 Pfam No apical meristem (NAM) protein 59 191 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0281 Mibi-ChrMibi04 5068187 5070897 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0281 56 212 NAC Transcription Factor Family AT3G49530 45.679 3.04e-37 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi04g0281 NAM 1.3e-26 No_clan