Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0271 ATGGAATTGACTCGAGGAGAAGCTGGAAATAAAGGGTATTCAGATCATAACAACAGCAGAGAAGAAGAAGTAGTACCTGAGGCAACTACTGAAGAAGAGGAATTATTAGCAGAAACAAGCAACAAGCAAACCAGTAAGCAATTATACTACCCCTTTTCCTCTTCTTCTAATCATAATTCTTCTTCACAACCTCCAAATCTATGGTTGGGAAGGAACATGCCTCATCATCATCATCATCATCATCAATATCCTCCTCATCATGATCATCAATCTCCAGAGGCAACAACCACTTCTGAATCTCACAATTCATCATCTGGGTTAGGGTTACACCACCATCAAGATGCACCTTCTAATTCCAATTCTAACAACAAGTTAGACTTCATGGATTTATCGCTAGGAAACCACAACAATAAGGAAGAACAAGAAGATGATCAAGAAGAAGAAGCCAACAAGAACAAGCCTATAGAGAAAGAACACATGTTTGATAAGGTAGTGACACCAAGTGATGTGGGGAAACTAAATCGCCTTGTGATCCCAAAACAACATGCTGAGAGGTATTTCCCCTTAGATTCTTCCTCCAATGAAAAGGGTCTCCTCTTGAACTTCGAGGACCGGAACGGCAAGCTATGGCGGTTCCGGTACTCTTATTGGAATAGCAGCCAAAGCTATGTGATGACCAAAGGTTGGAGTCGTTTCGTTAAAGAGAAAAAGCTCGACGCCGGCGACATTGTCTCCTTCCAGCGAGGCCTCGGCGAATCCTACAGACATCAGTTGTATATAGACTGGCGGCGCCGCCCCGATTACGCCGCCACCGCAGCCGATCACCACCACCACCTCCGCCACGCCGCCGCCGCCGGCGCAATTACACCGTTGCTTCTCCCAAATCAGTACTCAATCCGGTGGGACGGTCGGTTATACTCCGTCCCCGCGGTGGCGGCGGGGCCCGTGGCTCCTCCGCCGCCACCGCCACGTCACCACCACCACCAGCAAGTGAATTACAACAATTACCCCTTCCATCAACAACAATCAATTCACTACCAAAGGCAACAACATTTTCTTCCTCATCAACATCAACATCATCAGGTATATAGTGGAGGTCAAGGAAGTTATAATGAGCTGAATTTGGGATCCGGGTCGTCGCTTTATTACTTGAGGGGGGCGGCGGTGGGGCCCGCCGGAGACCGGGGTTTGATGGAGGGAGGAGGTGGCGGAGGCAATGTGAGTCCTATGATAATAGATTCAGTTCCGGTGTTACATGGGAAGGGAAGTGGTTCTACTACTAGTGGTAGTGGTAGGATTATTAATGATACAACTGGCAAGAAGTTGAGGCTATTTGGGGTGAATATGGAATGTTCTCCATCATCAAACACAAACTCAGTAGGACATGTGCCAATTATGGGTGATTCTTCACTTCCCTCACCAAAATTTCAGTTTATGAGACAATCCCATCATCATCATGAAGAACAAGAAGAAGAAGAAGAAGAGGACCCATCACTTTCTTCATCATCAGATCAAAAGGGGAAAACTTCTGTGCTTTTTGATTTGAGTCCATCCTTCAAATACCGACACTAG 1572 0.4644 MELTRGEAGNKGYSDHNNSREEEVVPEATTEEEELLAETSNKQTSKQLYYPFSSSSNHNSSSQPPNLWLGRNMPHHHHHHHQYPPHHDHQSPEATTTSESHNSSSGLGLHHHQDAPSNSNSNNKLDFMDLSLGNHNNKEEQEDDQEEEANKNKPIEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSSNEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGLGESYRHQLYIDWRRRPDYAATAADHHHHLRHAAAAGAITPLLLPNQYSIRWDGRLYSVPAVAAGPVAPPPPPPRHHHHQQVNYNNYPFHQQQSIHYQRQQHFLPHQHQHHQVYSGGQGSYNELNLGSGSSLYYLRGAAVGPAGDRGLMEGGGGGGNVSPMIIDSVPVLHGKGSGSTTSGSGRIINDTTGKKLRLFGVNMECSPSSNTNSVGHVPIMGDSSLPSPKFQFMRQSHHHHEEQEEEEEEDPSLSSSSDQKGKTSVLFDLSPSFKYRH 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0271 523 MobiDBLite consensus disorder prediction 95 130 - -
Mibi04g0271 523 CDD B3_DNA 159 248 IPR003340 GO:0003677
Mibi04g0271 523 Pfam B3 DNA binding domain 161 265 IPR003340 GO:0003677
Mibi04g0271 523 MobiDBLite consensus disorder prediction 1 158 - -
Mibi04g0271 523 ProSiteProfiles B3 DNA-binding domain profile. 161 266 IPR003340 GO:0003677
Mibi04g0271 523 MobiDBLite consensus disorder prediction 453 523 - -
Mibi04g0271 523 MobiDBLite consensus disorder prediction 40 68 - -
Mibi04g0271 523 Gene3D - 155 279 IPR015300 -
Mibi04g0271 523 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 28 475 IPR044800 GO:0003700
Mibi04g0271 523 SUPERFAMILY DNA-binding pseudobarrel domain 158 262 IPR015300 -
Mibi04g0271 523 FunFam B3 domain-containing protein 154 276 - -
Mibi04g0271 523 SMART B3_2 161 266 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0271 Mibi-ChrMibi04 4837169 4838740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0271 129 458 RAV Transcription Factor Family AT2G46870 47.305 1.59e-78 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mibi04g0271 B3 3.2e-28 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0271 04 4837169 4838740 Mibi04g0271 04 4837169 4838740 ECH