Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0268 ATGGATGCATACTCCTCTGGAGGGGAAGCGGTTGTTAAGATAAGAAAACCATATACAATCACAAAGCAAAGAGAAAGATGGACCGAGGATGAGCATAATAGGTTTCTAGAAGCCTTAAAGCTCTATGGGAGAGCATGGCAGCGCATTGAAGAACATATAGGAACAAAGACTGCTGTGCAAATCAGGAGCCATGCGCAGAAATTCTTTTCAAAGCTGGAGAAAGAGGCTCTTGAAAAGGGTGTAACAATAGGACAGGCTCTTGACATAGATATCCCTCCTCCACGGCCCAAAAGAAAGCCAACTAATCCTTATCCTCGGAAGACCAGTACTTGCTCTCCACCATCACATAATGGAACAAAAGATGACAAGCTAATTTCTGTTTCACCTTCGCATGGTAAACAAGCACTGGACTTAGAGAAAGAACCACCTCCAGAGAGATCTAGTGGAGATGAAAGACCAGTAAATGATACTGAAAATAAGGATGAGAACTGCTCGAAAGTATTTGCTATTCCACAGGAGGCACCCTGTTCCTCTATATCTTCAGCAAGAAACAGATCAATGTCATTGTCAGTGCCACTAAGAAACTCATGCATTTTAAGGGAGTTCATACCTTCAATAAGAGTGGGAATTACTCGAGATGAAACAAATGAATCTTCGGTCACTATTGAACTTGAAAATCAGAAGTGCAAGATAGATGATGGAAAACTAGAACAGACAAAAGCCTCTGAATTGGAGGCTTCCAATGCTTCAGGTGTAAAATTGGTACAAAGTCAGAAAACAGATGATCTAAATTGTGCATTAACAAATGGGATGCAAGACAGTCAGGATTCCTTAAGGCATGTCTTGGGGAACGCTCTTGATGGTAACCAGGGAACAAGTACACAAAAGCCTCCCCAAGATATGCTACTACGAGACTTTATATTTCAGCCTGTGGGAGAGGTTGGTGGGCAACCAAATATTTTCACAGATTCAGCTGCATCACAATCAAGAGAAAGTAAGAATAACACGCCTCGCTCTTCTATTCATCAATTATTTCCTGCTTACCCTCCCTTCCCGCAAGTTCTCTGTAGTCAAGATCATTGCCCTTCATTTTTTCACACGTCCCCCACATTTTCAAGTCTCATTGTCTCCACCCTAATGCAAAATCCTGCAGCCCATGCTGCAGCTAGTTTTGCTGCTACATTTTGGCCCCATCCAAATGCAGAAGCTTCATCTGAATCTCCTGCTTCCTCTCAAGGAGGTTTCACATCACGACAAATTGGCTCTCCAAGTATGGAAGCTGTTGCAGCTGCTACTGTGGCTGCTGCAACCGCATGGTGGACTGCCCATGGACTGCTTCCTTTGTGTGCTCCACTTCATTCTGCTTTCCCCTCTCCTCCTGCATCTGCGGTGGTAGTTCCTTCCATGAATGCTGGTGAAGCACAACCAATTGAAAAAGACCAGAAGGACACTACGGTCGAGAATCCTCCTCTGCAAGATGAGATGCCAAATGGAGAATATTCAGAGGCTCTGCAAGCTCAACATTCAGACTCCAAGTCTCAGGCTGTTTCTTCATCAGATTCCAAGTGTGGAGATGCCAAGTTAACCACTTCACTCAAGGCTGCTGAACATGACAAGAACGAAGCAATTTCTGAGCACCTCGATTCCAACAAGACCAACAATGGTAGAAAACCGGTTGACCGTTCTTCATGTGGCTCCAACACAACCTCTAGTAGTGATATAGAGACAGATGCATTAGAGAAGAATGAAAAAGGGAAGGAGGAATCCTTAACACCAGATGCAAACCACTTAACAACTGACCCCAGTAATCGCCGAAGTAAGAGTGCTGCCAACCTCACTGATTCTTGGAAAGAGGTTTCTGAAGAGGGGCGACAGGCCTTTCGGGCTCTCTTCTCTAGAGAGGTGTTGCCACAAAGCTTCTCACCACCACAACACTTGGAAAAGGACGTCCAGAAAGACCACAAAAATGAGCACCGGGAGCAGAACGTGGTTGAGAAAGATGAAGAACTTGACAGCAAAAAATACAGCTATGATCATGTACGGGTAGAGAAGAACATGCCATTTGTAGAAAACACACAAGAAGAGGAGGGACTTCTAACCATAGGGCTCGGGCAAGGAAAGCTCAAGGCATGTCGAACCGGGTTTAAACCTTACAAAAGATGTTCTGTGGAGGCCAAGGAAAATAGGGTTGGTTCTAGTAACCAAGGTGAAGAGAAAGGTCCCAAGAGAATACGCTTGGAGGGGGAGGCTTCAACTTGA 2259 0.4471 MDAYSSGGEAVVKIRKPYTITKQRERWTEDEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALEKGVTIGQALDIDIPPPRPKRKPTNPYPRKTSTCSPPSHNGTKDDKLISVSPSHGKQALDLEKEPPPERSSGDERPVNDTENKDENCSKVFAIPQEAPCSSISSARNRSMSLSVPLRNSCILREFIPSIRVGITRDETNESSVTIELENQKCKIDDGKLEQTKASELEASNASGVKLVQSQKTDDLNCALTNGMQDSQDSLRHVLGNALDGNQGTSTQKPPQDMLLRDFIFQPVGEVGGQPNIFTDSAASQSRESKNNTPRSSIHQLFPAYPPFPQVLCSQDHCPSFFHTSPTFSSLIVSTLMQNPAAHAAASFAATFWPHPNAEASSESPASSQGGFTSRQIGSPSMEAVAAATVAAATAWWTAHGLLPLCAPLHSAFPSPPASAVVVPSMNAGEAQPIEKDQKDTTVENPPLQDEMPNGEYSEALQAQHSDSKSQAVSSSDSKCGDAKLTTSLKAAEHDKNEAISEHLDSNKTNNGRKPVDRSSCGSNTTSSSDIETDALEKNEKGKEESLTPDANHLTTDPSNRRSKSAANLTDSWKEVSEEGRQAFRALFSREVLPQSFSPPQHLEKDVQKDHKNEHREQNVVEKDEELDSKKYSYDHVRVEKNMPFVENTQEEEGLLTIGLGQGKLKACRTGFKPYKRCSVEAKENRVGSSNQGEEKGPKRIRLEGEAST 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0268 752 MobiDBLite consensus disorder prediction 400 420 - -
Mibi04g0268 752 MobiDBLite consensus disorder prediction 531 555 - -
Mibi04g0268 752 MobiDBLite consensus disorder prediction 320 340 - -
Mibi04g0268 752 MobiDBLite consensus disorder prediction 594 615 - -
Mibi04g0268 752 MobiDBLite consensus disorder prediction 502 526 - -
Mibi04g0268 752 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Mibi04g0268 752 MobiDBLite consensus disorder prediction 319 340 - -
Mibi04g0268 752 MobiDBLite consensus disorder prediction 473 619 - -
Mibi04g0268 752 PANTHER SWI/SNF COMPLEX-RELATED 11 640 - -
Mibi04g0268 752 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Mibi04g0268 752 CDD SANT 26 69 IPR001005 -
Mibi04g0268 752 Gene3D - 26 73 - -
Mibi04g0268 752 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Mibi04g0268 752 MobiDBLite consensus disorder prediction 103 124 - -
Mibi04g0268 752 MobiDBLite consensus disorder prediction 556 575 - -
Mibi04g0268 752 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Mibi04g0268 752 MobiDBLite consensus disorder prediction 725 752 - -
Mibi04g0268 752 MobiDBLite consensus disorder prediction 646 671 - -
Mibi04g0268 752 MobiDBLite consensus disorder prediction 635 671 - -
Mibi04g0268 752 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Mibi04g0268 752 MobiDBLite consensus disorder prediction 576 593 - -
Mibi04g0268 752 FunFam protein REVEILLE 6 isoform X1 26 74 - -
Mibi04g0268 752 SMART sant 23 71 IPR001005 -
Mibi04g0268 752 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Mibi04g0268 752 MobiDBLite consensus disorder prediction 87 160 - -
Mibi04g0268 752 MobiDBLite consensus disorder prediction 134 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0268 Mibi-ChrMibi04 4746792 4754681 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi04g0268 Myb_DNA-binding 7.9e-13 CL0123