Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0260 ATGGACCAATCACAACAATCTCATTATTCTCAGTCCAAGCCAAAAATAAATCATAACAACTACGTTGAAGAAGAAGAAGAAGGCTTCTCCTACGCCATGCAGCTGGCCACTTCTACTGCCATTTCCATGGCCATGCAGACGGCGGTGGAGCTCGGCGTCTTCGACGTCATCCATAAAGCCGGCCGCACCGCCATGATCTCCGCCGCGGACATCGCCGCCGAGCTCTCATGCAAGAACTCCGATGCTCCTTCCGCCCTCGACCGCCTCCTCCGGCTTCTTGCATCTCACTCTGTTCTTTCCTGCTCCGTCGTCGAGGACGGAGGGCTGGGGAGTCTCCGGCGGTTGTACGGACTCTCTCCGGCGGCCAGATTCTATGTGAGGAATGAGGATGGAGTGTCGTTGGGTCCTGTGATGGCGTTGAATCTAGATAAGATCCTCCTTGATAGTTGGAGAGGATTGAAGGATGCAATATGTGAAGGAGGTATAGCGTTCAACAGGGTGCATGGGACACATTTATTTGAGTATCCGGGATTGGATTCAAGGTATAACGATGTTTTCAACAAGGCAATGGTGAATCATACCACTTTAGTTGTCACTAAGATTCTTGAATCCTACAAAGGTTTTAAGGATGTCACTACACTTGTTGACGTTGGTGGAGGTCTTGGGACTACTCTAAACTTGATCACTTCCAAATATCCTCACATTCAAGCCATCAATTTTGATTTGCCCCATGTCATCCAACATGCCCCTCCTTATCCTGGTACTTCCTCTGCTTCAAATCGCGTGGAACACATGGGAGGAGATATGTTTGAAAGTGTGCCTCAAGGATATGCAATCTTCATGAAGTGGATACTTCATGATTGGAGTGATGAATGGTGCTTAAAGCTGTTGAAGAACTGTCATAAAGCAATTCCTGATGATGGAAAAGTGATTGTGGTGGACGCAGTTTTGCCCATTGTACCACAGATTTCTGCTGCTGCAAAAAGCACCTACCAATATGATCTGTTGATGATGACTCATTGCCCAGGTGGCAAAGAGAGAAGTGAGCAAGAGTTCATGGATTTGGCTACTTCATCTGGGTTTAGGGGCATTCGATTTGAATGTTTTGTTCGTAACTTTTGGATTATGGAATTCTTCAAGTAG 1143 0.4689 MDQSQQSHYSQSKPKINHNNYVEEEEEGFSYAMQLATSTAISMAMQTAVELGVFDVIHKAGRTAMISAADIAAELSCKNSDAPSALDRLLRLLASHSVLSCSVVEDGGLGSLRRLYGLSPAARFYVRNEDGVSLGPVMALNLDKILLDSWRGLKDAICEGGIAFNRVHGTHLFEYPGLDSRYNDVFNKAMVNHTTLVVTKILESYKGFKDVTTLVDVGGGLGTTLNLITSKYPHIQAINFDLPHVIQHAPPYPGTSSASNRVEHMGGDMFESVPQGYAIFMKWILHDWSDEWCLKLLKNCHKAIPDDGKVIVVDAVLPIVPQISAAAKSTYQYDLLMMTHCPGGKERSEQEFMDLATSSGFRGIRFECFVRNFWIMEFFK 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0260 380 SUPERFAMILY "Winged helix" DNA-binding domain 23 128 IPR036390 -
Mibi04g0260 380 FunFam Caffeic acid O-methyltransferase 126 380 - -
Mibi04g0260 380 PIRSF O-mtase 9 380 IPR016461 GO:0008168
Mibi04g0260 380 Pfam O-methyltransferase domain 150 362 IPR001077 GO:0008171
Mibi04g0260 380 PANTHER O-METHYLTRANSFERASE 32 366 IPR016461 GO:0008168
Mibi04g0260 380 Gene3D - 9 125 IPR036388 -
Mibi04g0260 380 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 378 IPR029063 -
Mibi04g0260 380 FunFam Caffeic acid 3-O-methyltransferase 10 125 - -
Mibi04g0260 380 Pfam Dimerisation domain 43 94 IPR012967 GO:0046983
Mibi04g0260 380 Gene3D Vaccinia Virus protein VP39 126 380 IPR029063 -
Mibi04g0260 380 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 33 380 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0260 Mibi-ChrMibi04 4534789 4537728 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0260 25 380 Monolignol Biosynthesis Gene Families AT5G54160 50.000 7.68e-132 380