Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0253 ATGCCATTTTTGCAGATGTTGCAGAGTGTGGAATCTACACAACAGTTTTTCCCATTCTCAGGCGCAAATTTTCAAACACTTCTAAGGCTACAACAGAACCTGAAGAGACAAAAACAACCATGGGAAGAAGAAGGAGGAGGAGAAGAAGAAGAATCTCACATACCCCGATTGGAAACTCAAATCCAAGCTAAAGAACTTGAAAGCTGTGTCACAAACGACGTCGTTGAGATCCAATCGCCAGTGAAATCCGAGACCAACGAAGAATCTCATCTTCTTCCCCCTCCTTATTCATCATCACCCACCATGGTTCAGAAACAACAAGCTGAAAATCATTGCAGGGACCCCAAAAGAAGAAAGCGAAAGAGAATGAGACCAATCAAGAACAAGGAAGAAGTGGAAAACCAGAGAATGACCCACATTGCCGTTGAACGAAACAGGCGTCGCCAAATGAACGATCATCTCAGTGTTCTAAGAACACTCATGCCTCCTTCCTATATTCAAAGGGGTGACCAAGCTTCTATAATCGGAGGTGCAATTGATTTCGTGAAGGAATTGGAGCAACTACTTCATACCCTCGAGGCACAGAAGAGGATTAGGAAGAATGAAAAGATTGGATGGTCTTATAATAATGGAGAGACTGTGAAATCCATGGAAGCAGAAATGGAATGTGGTGGGAAAGAAGAAGGAGAAGGAGATGGGGAAGTGAAGGAAGCAGAGATAATAGAGGTGATGATGATTCAAACGCATGTGAACTTGAAAATTAGATGCAGAAAAAGGCAGGGGCAATTGGTGAGAGCCATTGTTGGATTGGAAGAACTTAGGCTTAGTGTTCTTCATCTCAATATAACTTCCTCGCTGGGATCGGTACTATACTGTTTCAATCTCAAGATAGAAGAAGAGTGTAAGCTAGGGTCGGCAAATGAAATAGCAGAAGCAGTGGGTCATATATTCAGAGCCATTGATATTTAG 969 0.4252 MPFLQMLQSVESTQQFFPFSGANFQTLLRLQQNLKRQKQPWEEEGGGEEEESHIPRLETQIQAKELESCVTNDVVEIQSPVKSETNEESHLLPPPYSSSPTMVQKQQAENHCRDPKRRKRKRMRPIKNKEEVENQRMTHIAVERNRRRQMNDHLSVLRTLMPPSYIQRGDQASIIGGAIDFVKELEQLLHTLEAQKRIRKNEKIGWSYNNGETVKSMEAEMECGGKEEGEGDGEVKEAEIIEVMMIQTHVNLKIRCRKRQGQLVRAIVGLEELRLSVLHLNITSSLGSVLYCFNLKIEEECKLGSANEIAEAVGHIFRAIDI 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0253 322 CDD bHLH_AtFAMA_like 137 209 - -
Mibi04g0253 322 Gene3D - 125 207 IPR036638 GO:0046983
Mibi04g0253 322 SMART finulus 140 191 IPR011598 GO:0046983
Mibi04g0253 322 MobiDBLite consensus disorder prediction 80 122 - -
Mibi04g0253 322 Pfam Helix-loop-helix DNA-binding domain 135 186 IPR011598 GO:0046983
Mibi04g0253 322 Coils Coil 182 202 - -
Mibi04g0253 322 PANTHER MAX DIMERIZATION, MAD 82 320 - -
Mibi04g0253 322 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 134 185 IPR011598 GO:0046983
Mibi04g0253 322 MobiDBLite consensus disorder prediction 80 108 - -
Mibi04g0253 322 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 134 200 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0253 Mibi-ChrMibi04 4473145 4475180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0253 127 321 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G01460 53.365 3.61e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi04g0253 HLH 2.2e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0253 04 4473145 4475180 Mibi04g0253 04 4473145 4475180 ECH