Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0252 ATGCAAGAACAAGCTCGGAGTCAAGTGAAAAGCGGTGCTAGCAATATGGAAGCACATAGCTCTCAACATGCCCAAATTGTTGAAGTCAGTGGTGATTTTCCTGAAGGAAGAAGAAACCCTGGAGGAAACAAGATTTGTGGGGAAGCACCATGTGGATTTGCAGATGCTGGGTCCATATCTAAGGATTCTAAAGAAAGATCAACATCAATGCGAAAGCTTTGGATTGCTGTGATCCTTTGTGTACTTTTCATGAGTGTTGAAGTATTTGGTGGCATTAAAGCCAATAGTCTAGCCATTCTGACTGATGCAGCCCACTTGCTTTCAGATGTAGCAGCCTTTGCCATCTCCCTGTTCTCTTTATGGGCTGCTGGATGGGAAGCCACACCCCGTCAATCTTATGGGTTTTTTAGAATAGAGATTCTTGGTGCATTGGTTTCTATTCAACTGATATGGCTGCTTGCAGGGATTCTGGTATACGAAGCTGTAGAAAGAATTATTGATGGTTCTCAGAAAGTGAATGGCTTCTTGATGTTTTTGGTTGCAGCATTTGGTCTTGTGGTTAACATCATCATGGCTTTATTATTGGGCCATGATCATGGCCATGGACATGATGACCATCATCATGGTTTAGGCCATGGTCATGGGTTTACAGTCTCGACCCACCATGACCATCATCATCATAGTGGTGAGGATCACAAGCACCATCATGATGAAGAAGACCCTCATCATTCTCATGATGATGATAAGCATCACCACGCCCATGACAGTGCTGCTAAGCCACTTCTTGATGGATCAAAAGACAAACCAGAAAAGAAGAGGCGGTGGAACGTAAATGTACAAGGGGCGTATCTCCATGTTCTAGGGGACTCTATCCAAAGCGTCGGAGTAATGATTGGGGGAGGTATCATTTGGTACAAGCCTGAGTGGCAAATAGTTGATCTAATCTGCACTCTTATTTTTTCAGTAATTGTTTTGTTCACAACGATCAATATGCTGCGGAACATACTGGAGGTTCTGATGGAGAGCACTCCACGTGAGATTGATGCGACAAAGCTGGAAAAGGGTTTGTTAGACATGGATGATGTAGTGGCTGTTCATGAGCTTCATATTTGGGCAATCACAGTGGGGAAGATTTTGTTGGCTTGCCATGTCAAAATCAGACCTGAAGCAGATACAGATGTGATGCTGGAAAAGGTTGTAAACTATATAAGAAGGGTTTATAACATCAGCCATGTAACTATTCAGATAGAGCGCTAG 1257 0.4328 MQEQARSQVKSGASNMEAHSSQHAQIVEVSGDFPEGRRNPGGNKICGEAPCGFADAGSISKDSKERSTSMRKLWIAVILCVLFMSVEVFGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAVERIIDGSQKVNGFLMFLVAAFGLVVNIIMALLLGHDHGHGHDDHHHGLGHGHGFTVSTHHDHHHHSGEDHKHHHDEEDPHHSHDDDKHHHAHDSAAKPLLDGSKDKPEKKRRWNVNVQGAYLHVLGDSIQSVGVMIGGGIIWYKPEWQIVDLICTLIFSVIVLFTTINMLRNILEVLMESTPREIDATKLEKGLLDMDDVVAVHELHIWAITVGKILLACHVKIRPEADTDVMLEKVVNYIRRVYNISHVTIQIER 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0252 418 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 20 418 - -
Mibi04g0252 418 TIGRFAM CDF: cation diffusion facilitator family transporter 70 418 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Mibi04g0252 418 Gene3D Cation efflux protein transmembrane domain 69 339 IPR027469 -
Mibi04g0252 418 MobiDBLite consensus disorder prediction 222 271 - -
Mibi04g0252 418 SUPERFAMILY Cation efflux protein transmembrane domain-like 67 341 IPR027469 -
Mibi04g0252 418 MobiDBLite consensus disorder prediction 1 22 - -
Mibi04g0252 418 MobiDBLite consensus disorder prediction 204 271 - -
Mibi04g0252 418 Pfam Cation efflux family 73 340 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Mibi04g0252 418 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 346 417 IPR036837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0252 Mibi-ChrMibi04 4461984 4465225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0252 16 418 Inorganic Solute Cotransporters AT2G46800 70.270 0.0 514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0252 04 4461984 4465225 Mibi04g0252 04 4461984 4465225 ECH