Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0250 ATGGGTGAAGTTGTCGTTGTACCCACGAATGATCATGGGATGGAGTCCGAGGATGACCAAAACAAGAACTTGGTTCGATGGGACAAATTCTTGCCTCGCATGGTTCTTAGAGTTTTACTTGTTGAAGCTGATGATTCTACCCGTCATGTTATTGCTTCCCTTCTCCGCAAATGCAGTTACAAAGTTGCTGCGGTTCCTGATGGACTAAAGGCATGGGAGACGCTGAATCGGAAAGCTTCTGAAATAGATCTCATATTAACTGAAGTGGAGTTGCCTTCAATATCTGGATTTGCACTTCTTACTTTGATCATGGAACATGATACATGCAAGAACATTCCTGTCATAATGATGTCTACTCACGATTCAGTTAGTTTGTCATTGAAATGCATCTTGAAAGGTGCTGCTGATTTTCTCATAAAACCTGTTCGGAGGAATGAGCTGAGGAACTTGTGGCAACATGTATGGAGAAGACATGAGAAAAAACTGGAGACTGCTTCTGAAAACAATGCTGCCAGCAATCATTCTAGTGGTTCTGTTGCTTCCTCGCAGAAAAACAATGGATGCCATGAGAAAGGGAGTGAGGCCCAAAGCACTTGTACATCGTCATTTTTGGAAGCTGAGAGTGCATACATGCAAAATATGCAGGATACATCCCATCTGAAGAGTTCTTCGAATTTGAGCAACATTGACACGGTGCAGAATGAGGATTCAACCATATTGGGCTTGGAGAGACAATCTATTAAGCTCAATAATGAAACTGGAGATAAGTCAGGGGCATTGTTACCACCAGCTGCAAAGTGTGTCAAGAATTTTGAATCAACAGATTTTGGGCAGGATCAAGGACACAATTGTGCTGAAAAGGAGAATCAAGTTGAAGTTCTTAGAGCAGAGTCAAGCAGAGAAAATCCTGACATGGATACAGAGATTCATGGATGCAACAATGAACTGGTAGAACCCTCTAGAGGAGCTATTGATTTGATTGCCGCATTCAATAATCTACCAGTAAAGGATTATGAAAGCTGTAATCTCAGTGGTAGTGGGGCAAAGACTTTTGATTTTGATCCACGATTGGAGCTTTCTCTAAGACGAGATTTTCCTGGCAGCTCATCTAAACAAACAATTGATGAAAAACAGGCTTTGAACCGTTCAAAGGCATCTGCCTTTTCTTGGTATAGCGGGTGTAAGTCTCCATCACCATCCGGAAGCTCTGCTAAAGCATCAGGACACAATGGGAAACCTCAGGAAGCCAGTAAATTATGTAGAAATATTGTTGATACTTCCCGTCAATATGGTGGCACAAATCATAGTTCAGAGAATATGGCAACCACTTCCATTGGTCAATCTGGTCAAGCTGAAATACAATTGCCAGACGGTCAACTTGGATCATTTCCTGCTACTGGTGTTGATTCTGATAACAAGCCTACTGGATCTGAATACGTTTTTTCATCTATGTTCAACACACAATCTGATGTTCATTCCACATGGAATCCAAAACATTGCCCAAAAGAGAGTTCTCCTTCTCCCATTATCACAAGTAACTCTTTCCAGTCTAATCATGAAAGTCACAATTCGGATCAACGTTTTCACAGTTCTGATGATGCCGCCTATACTTCTCATGATAAAATTGCAAATGAAGAAAGCAAATTGGATCCTATGAGGCAACATTCTTCTGCTGTTGATCAGTGCACTAGCTATGCCTCATGCCATGACACTGCAAGTCAGAACAATAAGGATGATATTAACAGTACTGGTGCATATAAACTCGCTCGCAAGATCGATGGAAATGCTTCTTCAGCTGCAGTAGTTGAGAGCAACCCTGAAAATTATGGGGACAGTGGCCATCATAATGACGATGGGTTTAGAGGGACAGATTCCCATTGTCCCAGCCACAGAGAAGCTGCTTTAACAAAGTTTCGGATGAAGCGAAAAGAGAGATGCTATGAGAAAAAGGTACGGTATCTAAGCAGGAAAAGACTAGCTGAGCAGCGTCCTCGGGTTAAAGGGCAGTTTGTACGCCAAGTACATAATACGGATCATCCTGTTGCTGATGTTGATGGTGGTTCCTGA 2067 0.4209 MGEVVVVPTNDHGMESEDDQNKNLVRWDKFLPRMVLRVLLVEADDSTRHVIASLLRKCSYKVAAVPDGLKAWETLNRKASEIDLILTEVELPSISGFALLTLIMEHDTCKNIPVIMMSTHDSVSLSLKCILKGAADFLIKPVRRNELRNLWQHVWRRHEKKLETASENNAASNHSSGSVASSQKNNGCHEKGSEAQSTCTSSFLEAESAYMQNMQDTSHLKSSSNLSNIDTVQNEDSTILGLERQSIKLNNETGDKSGALLPPAAKCVKNFESTDFGQDQGHNCAEKENQVEVLRAESSRENPDMDTEIHGCNNELVEPSRGAIDLIAAFNNLPVKDYESCNLSGSGAKTFDFDPRLELSLRRDFPGSSSKQTIDEKQALNRSKASAFSWYSGCKSPSPSGSSAKASGHNGKPQEASKLCRNIVDTSRQYGGTNHSSENMATTSIGQSGQAEIQLPDGQLGSFPATGVDSDNKPTGSEYVFSSMFNTQSDVHSTWNPKHCPKESSPSPIITSNSFQSNHESHNSDQRFHSSDDAAYTSHDKIANEESKLDPMRQHSSAVDQCTSYASCHDTASQNNKDDINSTGAYKLARKIDGNASSAAVVESNPENYGDSGHHNDDGFRGTDSHCPSHREAALTKFRMKRKERCYEKKVRYLSRKRLAEQRPRVKGQFVRQVHNTDHPVADVDGGS 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0250 688 MobiDBLite consensus disorder prediction 610 628 - -
Mibi04g0250 688 SMART REC_2 36 151 IPR001789 GO:0000160
Mibi04g0250 688 PANTHER TWO-COMPONENT RESPONSE REGULATOR 36 321 IPR045279 GO:0009736
Mibi04g0250 688 MobiDBLite consensus disorder prediction 605 628 - -
Mibi04g0250 688 MobiDBLite consensus disorder prediction 399 418 - -
Mibi04g0250 688 Pfam Response regulator receiver domain 38 149 IPR001789 GO:0000160
Mibi04g0250 688 Gene3D - 34 245 - -
Mibi04g0250 688 MobiDBLite consensus disorder prediction 494 521 - -
Mibi04g0250 688 ProSiteProfiles Response regulatory domain profile. 37 155 IPR001789 GO:0000160
Mibi04g0250 688 MobiDBLite consensus disorder prediction 166 194 - -
Mibi04g0250 688 CDD psREC_PRR 38 141 - -
Mibi04g0250 688 ProSiteProfiles CCT domain profile. 631 673 IPR010402 GO:0005515
Mibi04g0250 688 MobiDBLite consensus disorder prediction 494 534 - -
Mibi04g0250 688 MobiDBLite consensus disorder prediction 164 194 - -
Mibi04g0250 688 Pfam CCT motif 631 673 IPR010402 GO:0005515
Mibi04g0250 688 SUPERFAMILY CheY-like 36 166 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0250 Mibi-ChrMibi04 4435363 4439847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0250 630 680 Response Regulator Gene Family AT5G24470 82.353 1.49e-20 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Mibi04g0250 Response_reg 8.4e-21 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0250 04 4435363 4439847 Mibi04g0250 04 4435363 4439847 ECH