Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0242 ATGGTGGGAGGAGGGCAATACATTAATAATAACGACACAACATTGACAAAGATCTTCGTGGGAGGTCTTGCTTGGGAGACTCAAAGGGAGACAATGAGGAGATATTTTGAGCAGTTTGGAGATATTCTTGAAGCTGTTGTTATCACAGACAAGAACACTGGGAGATCCAAGGGTTATGGCTTTGTAAGCCCTTCTCTGTTTTTTTTATTTCCATTTTCTGGTTCTGTAATGAGGAACATGACAATGTGTGTTTTTGGGGTTTTGGTGATTTATTTAAATAAAAAGGTAACATTTAAGGATCCAGAAGCAGCCATGCGAGCATGTCAGAATCCTTCTCCAGTTATTGATGGAAGAAGAGCAAATTGCAATCTTGCTTCTCTTGGTGCAAACAAGAATCGCCCTCCTCCAACTCTTCAACTTGGTCTCATTTCATCCCTTTCCTTTTTCGTAGGGGAAGGTTCAGATCAGCATCTGGATTGGTGGGCTTGCCAGCAGCATATCATGGATCTTCCTCCACAATATTCCGACATCCCACAGGCCAATACACATTCCCATATTCGCCTTACAGAGAGTGGCCAGGCTTCTCATCATGGTTTTGGATCAGTTCATCAGTTTCCTCAAATGCTACACTTCCCAGTTCTTCAACATCAACATCACTATGCCACTCTCTCTCCTTCTCCAGTTCCTTCTTCAATGCCATTGCCAACAACTACTGATGAAGGGGAGGCATCAGCATCAATAGCAGAAGGAGGACAGACAGCATCAGTAGGAGCAGGTTCTTCACAAGTCTCTGCAGCGAAAGCTTCAGAACAAAACTCTTCAACTTAA 828 0.4324 MVGGGQYINNNDTTLTKIFVGGLAWETQRETMRRYFEQFGDILEAVVITDKNTGRSKGYGFVSPSLFFLFPFSGSVMRNMTMCVFGVLVIYLNKKVTFKDPEAAMRACQNPSPVIDGRRANCNLASLGANKNRPPPTLQLGLISSLSFFVGEGSDQHLDWWACQQHIMDLPPQYSDIPQANTHSHIRLTESGQASHHGFGSVHQFPQMLHFPVLQHQHHYATLSPSPVPSSMPLPTTTDEGEASASIAEGGQTASVGAGSSQVSAAKASEQNSST 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0242 275 SUPERFAMILY RNA-binding domain, RBD 9 62 IPR035979 GO:0003676
Mibi04g0242 275 CDD RRM_RBM24_RBM38_like 16 125 - -
Mibi04g0242 275 Gene3D - 5 134 IPR012677 -
Mibi04g0242 275 SMART rrm1_1 17 80 IPR000504 GO:0003723
Mibi04g0242 275 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 62 IPR000504 GO:0003723
Mibi04g0242 275 PANTHER BOULE-RELATED 96 237 IPR037366 -
Mibi04g0242 275 MobiDBLite consensus disorder prediction 222 275 - -
Mibi04g0242 275 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 63 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0242 Mibi-ChrMibi04 4394642 4396390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0242 10 62 C2H2 Transcription Factor Family AT2G19380 47.170 5.70e-11 60.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0242 04 4394642 4396390 Mibi04g0242 04 4394642 4396390 ECH