Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0241 ATGCCTGAAAACATGAGTATTTCAGTGAATGGACAATCTCAGGTCCCTCCTGGCTTCAGATTCCACCCCACCGAAGAAGAACTCTTACAGTACTACCTCAGGAAGAAGGTCTCCTATGAGAAGATAGACCTTGACGTCATTCGTGACGTCGATCTCAACAAGCTCGAGCCTTGGGATATTCAAGAGAAGTGTAAGATAGGAACCACACCCCAAAACGATTGGTACTTTTTCAGCCACAAAGACAAGAAGTACCCGACCGGAACTCGAACCAACCGGGCCACAGCCGCCGGATTCTGGAAAGCCACCGGCCGGGATAAGGTAATATATAGCAACGGGAAGAGGATTGGAATGAGGAAGACTCTTGTCTTCTACAAAGGTAGAGCCCCTCATGGCCAGAAATCTGATTGGATCATGCACGAATATCGCCTCGATGACAACACCAATGACACCAACATCGTGTCAAATGTGATGGGAGACGGAGGCCAAGAAGAAGGATGGGTGGTGTGCAGAATATTCAAGAAGAAGAACCACTTGAAAACCCTAGATTGCCCCTTAACTTCCTCCATAATTACGGGAGAATCCAACAGAAGAAGCCATACCAACATGTTTGATGACGATGAAGGAGCTTTAGAACAGATGCTTCAGCAAATGGGAAGAGGCTGCAAGGAAGAGAACGAAGTGATGAATTACAGTAACAACAACAACAACAATAATGGAAGATACAGTCTTTCAAGCTTCAACAACAACAGCAACAATAATGGTGTTGGTGATCATCATCATCATCATAATAGTTCTAACAATTACAATGAAAGATTCTTGAAGCTCCCAAGCTTAGAAAGTCCAAAATCCACAGAGAATAATAATCATAATAACATAGACCACAATGTGTACCATCCTATGATTTCAGACATGGAATCGTCATTCTCAACCGTTCATAATCACATAGATGGATCCAACGGTGGAAAACTTGCCAACTGGGCAGCTCTAGATCGTCTTGTTGCTTCCCAGCTCAATGGCCAGAATGAGTCTTCAAGGCAGCTAGCTTGCTTCAGTACTGACCCCACAAGTAGTGCTATGATGGGGTACTGTGGAAACGACGTCGTTCACGATCTTCAAATGCCAACCCTACGATCTTCCTCATCGTCAACGTCAACGTCCACCACTCACAGAGCTGCGTACGTGAGCCCTCACGCACAGGATTATAATAGCAGTGAGATTGACCTGTGGACCTTTGCCAGGTCAGCATCTTCGTTGTTGTCTTCGTCGTCATCGGAGCCACTGTGCCACGTGTCCAACACGTCAGTTTAA 1308 0.4557 MPENMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVSYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYSNGKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNTNDTNIVSNVMGDGGQEEGWVVCRIFKKKNHLKTLDCPLTSSIITGESNRRSHTNMFDDDEGALEQMLQQMGRGCKEENEVMNYSNNNNNNNGRYSLSSFNNNSNNNGVGDHHHHHNSSNNYNERFLKLPSLESPKSTENNNHNNIDHNVYHPMISDMESSFSTVHNHIDGSNGGKLANWAALDRLVASQLNGQNESSRQLACFSTDPTSSAMMGYCGNDVVHDLQMPTLRSSSSSTSTSTTHRAAYVSPHAQDYNSSEIDLWTFARSASSLLSSSSSEPLCHVSNTSV 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0241 435 MobiDBLite consensus disorder prediction 234 268 - -
Mibi04g0241 435 FunFam NAC domain-containing protein 24 178 - -
Mibi04g0241 435 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Mibi04g0241 435 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 281 - -
Mibi04g0241 435 SUPERFAMILY NAC domain 9 174 IPR036093 GO:0003677|GO:0006355
Mibi04g0241 435 MobiDBLite consensus disorder prediction 234 254 - -
Mibi04g0241 435 ProSiteProfiles NAC domain profile. 15 174 IPR003441 GO:0003677|GO:0006355
Mibi04g0241 435 Gene3D NAC domain 24 179 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0241 Mibi-ChrMibi04 4357212 4358893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0241 1 434 NAC Transcription Factor Family AT2G46770 51.345 1.18e-137 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi04g0241 NAM 4.1e-36 No_clan