Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0233 ATGAATGCCTCGAAATCTCGGACCCGTGTCGGGAAATACGAGCTTGGTAAAACCATTGGCGAGGGCAGCTTCGCTAAGGTAAAGTTTGCGAAAAACATTGAAACACAGCAACATGTCGCCATCAAAATCCTTGACCGTAACCATGTTCTTCGGCACAAGATGGTGGAACAGCTGAAGAGAGAAATTTCCACCATGAAGCTGATCAAGCATCCGAATGTTGTTAATATATTTGAGGTGATGGCAAGCAAAACAAAGATTTACATTGTCCTGGAATTTGTTGGAGGTGGAGAATTATTTGACAAAATAGCTCATGATGGGAGACTTAAGGAGAATGAAGCAAGGCAATATTTCCAACAACTTATCAATGCTGTTGATTATTGCCATAGCAGAGGTGTCTTTCACAGAGACTTGAAGCCTGAGAATCTTCTTCTGGACTCAAGTGGTATTCTTAAAGTTTCAGATTTTGGATTGAGTACATATTCACAGCAAGATGATGCATTGCTACGCACAGCCTGTGGAACCCCTAATTATGTTGCTCCTGAGGTGCTTAATGCTAAAGGCTATGATGGTTCAGCAGCCGATATTTGGTCATGTGGCGTTATTCTCTTTGTTTTGATGGCTGGATACTTACCTTTTGATGAGCCAAATCAGATGGCTTTGTATAAGAAAATTAGCAAGGCTGAATTCTCATACCCATCATGGTTTCCACCAGATGCAAAGAAACTGCTGAAACGTATTCTTGATCCAAACCCTCTCACAAGGATAAAAATTTCAGAACTCTTGGAAGATAAATGGTTCAAGGAAGGATACAAACCACCATATTTTGAAGAGGAAGAGGGTATAAATGTAGATGATGTAGCTGCAGCATTCAATGATTCCAAGGAAAACCTTGTGACAGAAACAAAAGAGAAACCTGTCTCCATGAATGCTTTTGAGCTCATTTCGAAGTCACAGAGCTTCAATCTTGACAGTTTGTTTGAGAAAGAGACGCATATTGTGAAGCGAGAAACACGATTTACTTCTCAGCGCCCTGCTCATGAAATTATATCTAAAATTGAGGAAGCTGCCAAACCTCTCGGATTTAATGTTCACAGGAAAAACTACAAGATGAAGCTCCAAGGTGACAAAAGTGGAAGGAAGGGACATCTCTCTGTGGCTACTGAGGTTTTTGAAGTGGCTCCCTCATTGCACATGGTGGAGTTGCGGAAGATGGGTGGTGACACACTGGAGTTTCACAAGTTCTACAAAAACTTCTCATCAGGTTTGCAAGATGTAGTATGGCACAATGTTGGAAAAAATGAAGAAAATATCGAGCAATCAAGGTAG 1326 0.4103 MNASKSRTRVGKYELGKTIGEGSFAKVKFAKNIETQQHVAIKILDRNHVLRHKMVEQLKREISTMKLIKHPNVVNIFEVMASKTKIYIVLEFVGGGELFDKIAHDGRLKENEARQYFQQLINAVDYCHSRGVFHRDLKPENLLLDSSGILKVSDFGLSTYSQQDDALLRTACGTPNYVAPEVLNAKGYDGSAADIWSCGVILFVLMAGYLPFDEPNQMALYKKISKAEFSYPSWFPPDAKKLLKRILDPNPLTRIKISELLEDKWFKEGYKPPYFEEEEGINVDDVAAAFNDSKENLVTETKEKPVSMNAFELISKSQSFNLDSLFEKETHIVKRETRFTSQRPAHEIISKIEEAAKPLGFNVHRKNYKMKLQGDKSGRKGHLSVATEVFEVAPSLHMVELRKMGGDTLEFHKFYKNFSSGLQDVVWHNVGKNEENIEQSR 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0233 441 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 413 - -
Mibi04g0233 441 SUPERFAMILY Protein kinase-like (PK-like) 10 293 IPR011009 -
Mibi04g0233 441 SMART serkin_6 13 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0233 441 ProSiteProfiles Protein kinase domain profile. 13 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0233 441 Gene3D Kinase associated domain 1, KA1 302 428 - -
Mibi04g0233 441 Pfam NAF domain 305 364 IPR004041 GO:0007165
Mibi04g0233 441 CDD CIPK_C 309 422 - -
Mibi04g0233 441 FunFam Non-specific serine/threonine protein kinase 4 92 - -
Mibi04g0233 441 Gene3D Transferase(Phosphotransferase) domain 1 93 292 - -
Mibi04g0233 441 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Mibi04g0233 441 Pfam Protein kinase domain 13 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0233 441 Gene3D Phosphorylase Kinase; domain 1 2 92 - -
Mibi04g0233 441 FunFam Non-specific serine/threonine protein kinase 302 428 - -
Mibi04g0233 441 FunFam Non-specific serine/threonine protein kinase 6 306 - -
Mibi04g0233 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Mibi04g0233 441 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0233 Mibi-ChrMibi04 4227288 4232618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0233 6 435 CBL-interacting serine-threonine protein kinases AT1G01140 75.744 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mibi04g0233 Pkinase 1.8e-72 CL0016