Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0229 ATGGATGACCTCCTCCTCTCCCCTTCTTCCCCCTCCTCCCTCCTCTCCTTCTCCCACTCTCCCCCTCCCCCTCCCCCTCCCTCCTCTCCCCTCCAAAACAAGCTCCAATTCTTACTCCAATCCCAACCCCACCCTTGGCTCTACGCCATCTTCTGGCAATCCTCCCCCGACGACCCCCTCCGCCTCCGCCTCTCCTGGTCCCACGGCCACTTCCACGCCTCCTCCTCCCACCACCACCACCGTCCACGTCACACCACCACCAACAACTTCCTCATCAAGGGCATCCATGAATCCTCCCTCGTCGACGACAACCTTAACGACGCCGAATGGTTCTACGTCATGTCCCTCACCCGTACCTTCTCTCTCTCCCCTGACTCCTCCTCCTTGTCCCTCCCCGCCAAGGCCTTCTCCTCCGGCTCCCCCATCTGGCTCAACGACATCCACCACCTCCATGGATGTGACAGAGCCAAAGAAGCCTCCCTCCATGGCATCCGTACACTCGTCTGTGTTCCCGCTAACAATGGTGTCCTCGAAATAGGTTCCACTGACGTCATCCCAAGATACCCCACCCTCATCCAACAAGTCCACTCCCTCTACGGCGGTCTCCTCCTCTCAGGTGAGCGGCCCCCGAACCATGTCGACTTCCTCGACGACACTGTCTCCTTCGCCGACATTATCGCGGGCCGCCCGGGGGAGGCCGCCGTGGTGGAGGACGAGAAGCCCGCGGTGGTTAAGCCGCGGAGGAAGGTGAGGTCCTCCTACGTGGACTCGGAGAATTCGCATTCGGATTCCGACGGGCCCAAGGCCCAGGCCCAGCCCAAGAAGAGGGGGAGGAAGCCCGGGCCGGGGAGGGAGACGCCGTTGAACCACGTGGAGGCGGAGAGGCAGAGGAGAGAGAAGCTGAACCACAGGTTCTACGCGCTGCGGGCCGTGGTCCCCCACGTGACCCGGATGGACAAGGCCTCGCTGTTATCCGACGCCGTCTCGTACATCAACGAGCTCAAGGGGAAGATTGAGAAGCTTGAGTGTCAGACTCAGAGGGAGCCTAATGGTGTGAATAGTGGGAGGAGGGTGAAGGTGGAAATGGCGGACACTGTGGAGTCGACGGTGGAGCAGGCCGGGCTGGGCTTGAGCGTGGGCCTGGGCCTGGGCCTGGGCGGGCTTGAGGTCGACGTCAGGATCATCGGGCCGGACGCGATGGTGAGGGTTCAATCGGACAACCGGAACCACCCCGGAGCTAGGCTCATGGATGCCCTGAGAGACTTGGAGCTTAAGGTTCACCATGCCAGCATGTCATGTGTGAATGAGGTTATGCTACAAGATGTGGTCGTTAAGATCCCACATGGCCTGAGGAGTGATGAAAGCCTCATCAAATCTGCTATTATCAGAAGACTGGAACATTAG 1404 0.6047 MDDLLLSPSSPSSLLSFSHSPPPPPPPSSPLQNKLQFLLQSQPHPWLYAIFWQSSPDDPLRLRLSWSHGHFHASSSHHHHRPRHTTTNNFLIKGIHESSLVDDNLNDAEWFYVMSLTRTFSLSPDSSSLSLPAKAFSSGSPIWLNDIHHLHGCDRAKEASLHGIRTLVCVPANNGVLEIGSTDVIPRYPTLIQQVHSLYGGLLLSGERPPNHVDFLDDTVSFADIIAGRPGEAAVVEDEKPAVVKPRRKVRSSYVDSENSHSDSDGPKAQAQPKKRGRKPGPGRETPLNHVEAERQRREKLNHRFYALRAVVPHVTRMDKASLLSDAVSYINELKGKIEKLECQTQREPNGVNSGRRVKVEMADTVESTVEQAGLGLSVGLGLGLGGLEVDVRIIGPDAMVRVQSDNRNHPGARLMDALRDLELKVHHASMSCVNEVMLQDVVVKIPHGLRSDESLIKSAIIRRLEH 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0229 467 MobiDBLite consensus disorder prediction 237 295 - -
Mibi04g0229 467 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 31 198 IPR025610 -
Mibi04g0229 467 Coils Coil 324 344 - -
Mibi04g0229 467 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 285 334 IPR011598 GO:0046983
Mibi04g0229 467 Pfam Helix-loop-helix DNA-binding domain 289 334 IPR011598 GO:0046983
Mibi04g0229 467 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 286 350 IPR036638 GO:0046983
Mibi04g0229 467 MobiDBLite consensus disorder prediction 1 16 - -
Mibi04g0229 467 Gene3D - 283 349 IPR036638 GO:0046983
Mibi04g0229 467 MobiDBLite consensus disorder prediction 1 31 - -
Mibi04g0229 467 MobiDBLite consensus disorder prediction 17 31 - -
Mibi04g0229 467 PANTHER MYC 21 464 IPR045084 GO:0003700|GO:0006355
Mibi04g0229 467 SMART finulus 291 340 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0229 Mibi-ChrMibi04 4182287 4183690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0229 1 465 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G17880 32.923 5.27e-82 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi04g0229 bHLH-MYC_N 1.5e-37 CL0161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0229 04 4182287 4183690 Mibi04g0229 04 4182287 4183690 ECH