Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0219 ATGATTCTCCACAATCCATTTTTCCTATTCATTCTAATCATGTTCTTGTTATACATAACTCGTGTGATTCTCTTGAAAACAGGATTGATGTACACAGTGAAGAAATTCTGGAGAATCATTGAAGATCGTTTTTATGTTTACCAGTGTTTCAGAGTTCCAGAACTCCATGAAGACATGCTTGAGAATCCTCTCTACAGGAAGGTCTCTCTCTATCTGCATTCTCTTCCTTCCATCGAAGACTCCGATTTCATCAACTTAATCACCAGGAAGAAGAACAACGACATCATTCTCAGCCTCGATTCAAATCAGATCATCGAGGACGATTTTCTCGGAGCTAGAGTTTTTTGGCTCAATGAACGAGACGAGAAATCTAACAGAGCGTTCATCTTGAAGATTAGGAAATCTGACAAGCGTCGAATTCTCCGTCCTTATCTCAACCACATCCACACCGTCGCTGAAGAAATCGATCAACAAGCAAATCGTGAACTGAAGCTCTTCATGATCACCGCCACCGACTCGATTGGCGGTTATGGAAATCAACGGTGGAGATCCGTTCCATTCACGCATCCTTCAACCTTCGAAACAATCGCCATGGAAAACGACCTCAAACAAAAGGTGAAATCAGATCTCGAATCCTTCCTCAACGCAAAGCAATTCTACAACCGAATCGGCCGCGTCTGGAAACGAAGCTTCCTCCTGTACGGACCATCCGGAACCGGAAAATCAAGCTTCATCGCCGCCATGGCGAATTTCCTCAGATTCAACATCTACGACATGGACCTCACAAAACTCCAAACCGATTCAGATCTGAAATCAATGCTCCTCCAAACATCTCCAAAATCAATCATCGTCATCGAAGACCTAGACCGGTTCACAAAACACAAACCAAACACATCAGGAATCCTCAATTTCATGGACGGAATCCTCACATCAAGCTGTACGGACGAGACGGTTATGGTTTTCACGATGAACAGTAAGGACAATGTGGATCCGGATCTGATTCGACCGGGTCGGGTCGATGTTCATATAAAATTCAGCCTGTGTGATTTTTCGGCGTTCAAGAATCTAGCGAGTAATTATTTAGGGCTGAAGGAACACAAGCTATTCTCTGAGGTTGAAGAGATGTTTGAGAAGGGAGCGAGTTTGAGTGCCGCGGAAATCGGCGAGTTGATGATAGCGAATAGGAACTCGCCGAGTCGGGCGATTAAATCGGTGATCGGCGCGTTGAGAACGGACGGTGATGGGAGGGGAGGGATGATCGGACGGCGGTTAGGGGGTGATTGTAAGGATCGTAGTGTGGAGGTTATGGAGGAACCGGAGGGAGTTCTCTGCGGTGGTGATGGTTTCCATACGGTTAAGGATGTGAGGAAATTGTATGGTTTTTTTAGATTGAGGAATAACAGGAAATCTCAGCCGTTGTTGCTAAGGCGATGA 1434 0.4533 MILHNPFFLFILIMFLLYITRVILLKTGLMYTVKKFWRIIEDRFYVYQCFRVPELHEDMLENPLYRKVSLYLHSLPSIEDSDFINLITRKKNNDIILSLDSNQIIEDDFLGARVFWLNERDEKSNRAFILKIRKSDKRRILRPYLNHIHTVAEEIDQQANRELKLFMITATDSIGGYGNQRWRSVPFTHPSTFETIAMENDLKQKVKSDLESFLNAKQFYNRIGRVWKRSFLLYGPSGTGKSSFIAAMANFLRFNIYDMDLTKLQTDSDLKSMLLQTSPKSIIVIEDLDRFTKHKPNTSGILNFMDGILTSSCTDETVMVFTMNSKDNVDPDLIRPGRVDVHIKFSLCDFSAFKNLASNYLGLKEHKLFSEVEEMFEKGASLSAAEIGELMIANRNSPSRAIKSVIGALRTDGDGRGGMIGRRLGGDCKDRSVEVMEEPEGVLCGGDGFHTVKDVRKLYGFFRLRNNRKSQPLLLRR 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0219 477 Pfam ATPase family associated with various cellular activities (AAA) 232 346 IPR003959 GO:0005524|GO:0016887
Mibi04g0219 477 CDD AAA 228 347 - -
Mibi04g0219 477 Pfam Domain associated at C-terminal with AAA 33 116 IPR025753 -
Mibi04g0219 477 PANTHER BCS1 AAA-TYPE ATPASE 41 409 - -
Mibi04g0219 477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 404 IPR027417 -
Mibi04g0219 477 SMART AAA_5 227 349 IPR003593 -
Mibi04g0219 477 Gene3D - 183 343 IPR027417 -
Mibi04g0219 477 Gene3D - 344 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0219 Mibi-ChrMibi04 3979082 3980515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0219 229 347 Calmodulin-binding Proteins AT3G56690 26.471 5.81e-08 53.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0219 04 3979082 3980515 Mibi04g0219 04 3979082 3980515 ECH