Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0214 ATGGGAAGAGCTCCTTGCTGTGCAAAAGTAGGGTTGCACAGAGGTCCATGGACTCCTAAAGAAGACGCATTGCTCACCAAATATATCCAAGCTCATGGCGAAGGCCAATGGAGATCCTTACCTAAACGAGCTGGGCTTTTGAGGTGTGGAAAGAGTTGCAGATTGAGATGGATGAACTATCTACGGCCGGACATAAAGAGAGGAAACATAACACCTGAAGAAGACGATCTCATAATCCGAATGCACTTTCTTCTTGGAAATCGTTGGTCTCTCATTGCAGGCAGATTGCCTGGACGAACAGATAATGAAATCAAGAATCACTGGAACACACATCTTAGCAAAAGGCTAAAGAACCAAGGAACCGATCCCATCACTCACAAGAAGCTCTCATCATCCTCCTCCTCACTACCTAACAAGAAGACAGGTAAGAAGAAGAAGAAAAGCAAGGCTCGTGAGAATAACAAAAATGGAGTACAAGTAGAGAAGGATGAAGAAGAGAAGAAGACAATAGTGTATCTTCCAAAGCCAATAAGAATTACAGCCTGTTTGTCTTCTTCAATTCCAAGAAGTGATAGTAACCAAAACTTGAACTCGTTTGACTCCAACTCAGCAAGTGGATCCACTAGCCAGGAAAAGGACGAGGAAGGGAAGGTTCCTTGGGGTTGGGGAAAGATTAATAATAATAGTAATAATAACTATAGTAATTATAATTATAATAATAATGATAATTATAACTATACTTATGGTGAGGAAGAAGATCATGGTGGGTTTGTGGGGATACTTGAAGAAGACAATGAGTTGGTCAACGGGTCAGACATGGAGGGGCAATCGGAGTTTCTTCCGGCATCGGTGGAGCAACACGGGACACTGGAGAAGCTGTACGAGGAATACTTTCAACTCTTGAATAACCAAGAAAATCAAGATGAGTTGAAGTCTTTTGCTGAATCCTTGTTGGTTTGA 960 0.4188 MGRAPCCAKVGLHRGPWTPKEDALLTKYIQAHGEGQWRSLPKRAGLLRCGKSCRLRWMNYLRPDIKRGNITPEEDDLIIRMHFLLGNRWSLIAGRLPGRTDNEIKNHWNTHLSKRLKNQGTDPITHKKLSSSSSSLPNKKTGKKKKKSKARENNKNGVQVEKDEEEKKTIVYLPKPIRITACLSSSIPRSDSNQNLNSFDSNSASGSTSQEKDEEGKVPWGWGKINNNSNNNYSNYNYNNNDNYNYTYGEEEDHGGFVGILEEDNELVNGSDMEGQSEFLPASVEQHGTLEKLYEEYFQLLNNQENQDELKSFAESLLV 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0214 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mibi04g0214 319 Gene3D - 14 66 - -
Mibi04g0214 319 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 230 - -
Mibi04g0214 319 FunFam Myb transcription factor 11 67 - -
Mibi04g0214 319 FunFam MYB transcription factor 68 129 - -
Mibi04g0214 319 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi04g0214 319 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mibi04g0214 319 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi04g0214 319 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mibi04g0214 319 MobiDBLite consensus disorder prediction 186 209 - -
Mibi04g0214 319 CDD SANT 71 112 IPR001005 -
Mibi04g0214 319 Gene3D - 69 133 - -
Mibi04g0214 319 MobiDBLite consensus disorder prediction 186 231 - -
Mibi04g0214 319 MobiDBLite consensus disorder prediction 114 164 - -
Mibi04g0214 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mibi04g0214 319 MobiDBLite consensus disorder prediction 114 138 - -
Mibi04g0214 319 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi04g0214 319 CDD SANT 16 61 IPR001005 -
Mibi04g0214 319 SMART sant 66 114 IPR001005 -
Mibi04g0214 319 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0214 Mibi-ChrMibi04 3858478 3859782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0214 1 141 MYB Transcription Factor Family AT4G38620 67.376 2.31e-68 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi04g0214 Myb_DNA-binding 9.4e-14 CL0123