Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0209 ATGGAGGCCAAACCCCACCAACCATGCGCAGCTTGCCGGATGCTTCGCCGGAGATGTGACAACAACTGCCTCCTCTCTCCATACTTTCCGGCCGATGACCTCGACAAGTTTGCCGTCGTTCACAGAGTATTCGGGGCCAGCAACGTTATCAAAATGATTCAGATGGTGGAGGAGACGAAAAGGGAGGATGCAGTGAAAGCGATAGTGTACGAGGCAATGGCGAGGGTGAGGGATCCAGTGTATGGCAGTGCAGGGACTATACAACAACTACAAAAGATGGTTCAACAACTCAAGTCGGAGGTAGAAACCATGAAGGCTAGGGTTTCAGAGGTGCAACAAAAAAGAGACCAAATGCTCTTGAATATTAATCATCTTCACCACCACCACAATATAATTGATTATCAGTTTCCTATCAATGACCAAGACCCCATCTTTGATGACTATTATGCTGCTGTTTCGTCCCACGACTCAATGGATCAATTTCCCTTCCAAACTGATTGGGTTCTGTAG 510 0.4725 MEAKPHQPCAACRMLRRRCDNNCLLSPYFPADDLDKFAVVHRVFGASNVIKMIQMVEETKREDAVKAIVYEAMARVRDPVYGSAGTIQQLQKMVQQLKSEVETMKARVSEVQQKRDQMLLNINHLHHHHNIIDYQFPINDQDPIFDDYYAAVSSHDSMDQFPFQTDWVL 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0209 169 Coils Coil 87 121 - -
Mibi04g0209 169 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
Mibi04g0209 169 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 119 - -
Mibi04g0209 169 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Mibi04g0209 169 SUPERFAMILY Spectrin repeat 64 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0209 Mibi-ChrMibi04 3783488 3784138 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0209 8 161 AS2 family AT2G28500 42.857 6.00e-40 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mibi04g0209 LOB 1.6e-38 No_clan