Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0207 ATGGAGCCAACTACACCTCCTCCCTCCACTCCCCACGACGACCGAAACCCCGCCGCGTCCACCGCCGTCGACAAACCCGACACCTCGCGCGTGGGGGGGACGCGCCACCCACTCTACCGCGGCGTCAGAAAGCGGCGGTGGGGGAAATGGGTGTCGGAAATCCGAGAACCCAGGAAAAAATCCAGAATATGGCTGGGCTCTTTTCCGGTGCCGGAGATGGCGGCGAAGGCGTATGACGTGGCGGCTTATTGCCTGAAAGGCCGGAAAGCCCAGCTCAATTTCCCCGACGAGGTCGAACTCTTGCCCCGGCCGCCGTCCTCGGCCGCGAGAGACATCCAGGCGGCGGCGGCCAAGGCAGCGAATTCGATGAAATCCAAGAAAGGCAACAACAACAACAGCAACAACATTGTCATGATGTCGGACGGCGACGGTGACAGCGGTGGGGATGATTTTTGGGGGGAGATTGAGCTGCCGGAGCTGATGAATAATAATAGTGGGCGTTCCTGGGGTTGTCCAAGTGGGTCCTCTTCGGCGTGGGGCCCACCCGGCGATATGACCGGGTGGCCGGAGATGGAGATTCCGGCGCAACAGCAACCATTCATGGCGTGCTTATGA 615 0.6098 MEPTTPPPSTPHDDRNPAASTAVDKPDTSRVGGTRHPLYRGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAYCLKGRKAQLNFPDEVELLPRPPSSAARDIQAAAAKAANSMKSKKGNNNNSNNIVMMSDGDGDSGGDDFWGEIELPELMNNNSGRSWGCPSGSSSAWGPPGDMTGWPEMEIPAQQQPFMACL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0207 204 MobiDBLite consensus disorder prediction 161 175 - -
Mibi04g0207 204 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 21 161 - -
Mibi04g0207 204 MobiDBLite consensus disorder prediction 117 185 - -
Mibi04g0207 204 MobiDBLite consensus disorder prediction 1 37 - -
Mibi04g0207 204 ProSiteProfiles AP2/ERF domain profile. 38 95 IPR001471 GO:0003700|GO:0006355
Mibi04g0207 204 Gene3D AP2/ERF domain 38 96 IPR036955 GO:0003700|GO:0006355
Mibi04g0207 204 CDD AP2 37 96 IPR001471 GO:0003700|GO:0006355
Mibi04g0207 204 FunFam Ethylene-responsive transcription factor 2 37 96 - -
Mibi04g0207 204 PRINTS Ethylene responsive element binding protein signature 39 50 IPR001471 GO:0003700|GO:0006355
Mibi04g0207 204 PRINTS Ethylene responsive element binding protein signature 77 97 IPR001471 GO:0003700|GO:0006355
Mibi04g0207 204 Pfam AP2 domain 37 87 IPR001471 GO:0003700|GO:0006355
Mibi04g0207 204 MobiDBLite consensus disorder prediction 123 140 - -
Mibi04g0207 204 SUPERFAMILY DNA-binding domain 38 97 IPR016177 GO:0003677
Mibi04g0207 204 SMART rav1_2 38 101 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0207 Mibi-ChrMibi04 3718507 3719121 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0207 34 204 AP2-EREBP Transcription Factor Family AT1G01250 58.523 1.78e-56 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi04g0207 AP2 3.8e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0207 04 3718507 3719121 Mibi04g0207 04 3718507 3719121 ECH