Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0206 ATGAAGCTTGAGTTGGGTTTAGGAGGTGTGTTGTGGAATGATGAAGAAAAAGCCATGGTTTCATCTGTTCTGGGAAATCGAGCTTTTGAATACTTGGTTACAAACCCTGTGGCAAACGACCATTTGTTAATGACAGTTGGAAGCGATGAAAGTTTGCAGAACAAGCTTTCGGATCTCGTGGACCGTCCGAATGTATCGAATTTCAGCTGGAACTACGCGATTTTTTGGCAGATATCACACTCTAAGAATTCTGGGGATTGGGTTTTGGGGTGGGGAGATGGATGTTGCAGAGAACCTAAGGGTGAAGAAGAAGAAGGTGGAGTTAGAGGGCTTCTTACTTTTCGCCTGGAAAAAGTTGAGATGCAGCAAAGGATGAGGAAAGGGGTGCTTCAGAAGCTTCATACAACATTTGGGGGTTCTGATGAAGACAATTATGCCTTTGGATTAGATAGGGTTACTGATACAGAAATGTTCTTTCTGGCTTCCATGTACTTCTCCTTCCCTCGAGGCCATGGCGGTCCTGGTAAATGCCTTGCTTCCGGGAAGCATGTTTGGTACTCTGATGCACTTAGCTCTGATTACTGTGTGAGATCATTTTTGACGAAATCAGCTGGAATTCAGACCATAGTTTTGGTTCCTACTGACATAGGAGTGGTGGAATTGGGTTCTGTGAGGATAGTAGGAGAGAGCATAGAATTGTTGCAGATGATAAAATCAGAGTTTTCTACACAGTTGTCAATTCCTAGGGTTTCCCCTCTTTCACCATTGCCTGTTGTGGGGAATGAGAAGAGAGATGAAAACGGTATCTTTTCTGGTTTGCCGGTTGGGGATAAGGTGGAGGGAGTTCCGAAGATTTTTGGGCAGGACTTGAACTCGGTAAACTCTGGTCGTCCCCATTTTAGGGAGAAGCTTGCTGTGAGGAAAATGGAGGAGAGGCCTTGGGCGGGTTGTAGCCAGCCCAATGGCAATAGTGTTAGCTTTCCAACTCCAAATGTGCGAAACGGTATTCATGGATCGAGCTGGGCTGCTAATCAAGTGGGCAAACAGGCGAGCCCGACTGATATTTATCCTTCAACGTCCGCAGGTTGTAATGCACCAGAGGAAATTAACCAATTTAGGCAAGACTTTCGGCTTAACAACTACCAACCACAAAGGCAGGTGCAAATGCAAATTGATTTTTCTGGAGCCACTTCAAGGCCTTCTGTGAGACCAATCAATGCTGAATCAGAGCTATCTGATGTTGAAGCTTCATGCAAAGAAGAGCAGCTGGGTGCAACAGATGAAAGGAGGCCGAGGAAACGGGGTAGAAAGCCTGCCAATGGAAGGGAAGAGCCTCTGAACCATGTGGAAGCAGAGAGGCAGAGGCGTGAGAAGCTGAATCAGCGGTTCTATGCTCTTAGGTCTGTAGTACCCAATATATCCAAGATGGATAAGGCATCTTTGCTGGGAGATGCCATTGCCTATATCCATGAGCTTCAAGCAAAACTCAAGATCATGGAATCTGAGAGAGACAGATCCGGAAGCACTTCAAGTGTTCCTAAAGTTGAAATTCACAATCAAGCCACCGATGTCGATATTCAAGCCACCCAGGATGAGGTAATAGTGAGGGTGAGCAGCCATCTCAATGCTCATCCTATTTCAAGAATTATCCAAAAGTTCAAAGATGCAGAAATTAGTGTTGTTGAGTCGAAGTTTGCGACTGCAAATGACACCTTGCTCCATTCCTTTGTGATCAAGTCCCAAGGATCTGAGCCGCTGACGAAGGAGAAGTTGATTGCAGCATTTTCTTGA 1791 0.4556 MKLELGLGGVLWNDEEKAMVSSVLGNRAFEYLVTNPVANDHLLMTVGSDESLQNKLSDLVDRPNVSNFSWNYAIFWQISHSKNSGDWVLGWGDGCCREPKGEEEEGGVRGLLTFRLEKVEMQQRMRKGVLQKLHTTFGGSDEDNYAFGLDRVTDTEMFFLASMYFSFPRGHGGPGKCLASGKHVWYSDALSSDYCVRSFLTKSAGIQTIVLVPTDIGVVELGSVRIVGESIELLQMIKSEFSTQLSIPRVSPLSPLPVVGNEKRDENGIFSGLPVGDKVEGVPKIFGQDLNSVNSGRPHFREKLAVRKMEERPWAGCSQPNGNSVSFPTPNVRNGIHGSSWAANQVGKQASPTDIYPSTSAGCNAPEEINQFRQDFRLNNYQPQRQVQMQIDFSGATSRPSVRPINAESELSDVEASCKEEQLGATDERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAIAYIHELQAKLKIMESERDRSGSTSSVPKVEIHNQATDVDIQATQDEVIVRVSSHLNAHPISRIIQKFKDAEISVVESKFATANDTLLHSFVIKSQGSEPLTKEKLIAAFS 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0206 596 CDD bHLH_AtAIB_like 440 514 - -
Mibi04g0206 596 MobiDBLite consensus disorder prediction 393 454 - -
Mibi04g0206 596 Gene3D - 436 507 IPR036638 GO:0046983
Mibi04g0206 596 PANTHER MYC 41 594 IPR045084 GO:0003700|GO:0006355
Mibi04g0206 596 FunFam Transcription factor bHLH13 436 509 - -
Mibi04g0206 596 Pfam Helix-loop-helix DNA-binding domain 447 493 IPR011598 GO:0046983
Mibi04g0206 596 SMART finulus 449 498 IPR011598 GO:0046983
Mibi04g0206 596 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 443 492 IPR011598 GO:0046983
Mibi04g0206 596 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 446 507 IPR036638 GO:0046983
Mibi04g0206 596 MobiDBLite consensus disorder prediction 413 454 - -
Mibi04g0206 596 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 52 241 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0206 Mibi-ChrMibi04 3667506 3669296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0206 5 596 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 50.962 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi04g0206 bHLH-MYC_N 1.3e-51 CL0161