Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0194 ATGAAGCTCCTATTATTTATCCTATTTTTGTTTGCTCCTTTCTATGTTACATCTTCCTTGAGTTTGAATGGGTTGACTCTATTATCACTACTTAACCACTGGACTTCCGTGCCACCTTCCCTAAATTCAAGCTGGAAGTCCTCTGATTCTACCCCTTGTTCATGGCCAGGGATACAATGCAACCGTTACCAAAACGTGGTCCTCCTAAACCTCACTGCTTCTCAGATTGTAGGCCAAGTTGGACCTGAAATTGGACGGTTGACTCACTTGCAGAAACTTTTGTTGGCCTCAAATGGTTTCTCAGGTACAATACCCTCAGAGTTAGGTAATTGTAGTATGCTTGAGTATATTGATCTCTCTGATAATGATTTGTCAGGAAATATACCCCCCGAAATTGGTAATTGCAAATCTTTGAAGTCGTTACATTTACATTTCAATCAACTAGAGGGAGAAATTCCAAATGAATTGGGAAGACTAAACAAGTTGAAGGACCTTGAATTGCATTCCAACCATTTGACAAGCGAAATTCCGCATGCAATTTGGAAGATTCAAAGTCTTAAGCATGTCCTTCTTCATAATAATAGGCTTTTTGGGATGTTACCATTAGAGCTGACAGAGCTGAAGCATGTGGAAAATATCTCATTGGCTGAAAACCAATTATTTGGATCAATTCCTCAAGGCTTGGGAATCAATAGCAGTTTAGTGAGGTTGGACTTGGTGTATAACAAGTTCACTGGTTACATACCTCCAAATCTTTGTTTTGGAAAGCAATTACGCCTACTAAGTTTAGGTTTTAATCAACTCAAAGGGGGAATACCTCATGATATTGGAAGATGTGCAACACTTGGGAGGCTAGTTCTCAATGGAAGTAAACTTTCTGGATATATTCCTGATTTTGAAGGTAATCAGAATCTCATATACATGGACATCAGCAATAACAGCTTTAGCGGAGCAATTCCCTCAAGTTTAGGAAACTGCAAAAATCTCACTGCTTTAATTTTGTCCACAAATGACATTACAGGGCATATACCCTCAGAGCTAGGAAATCTTGTGGATCTTCAGGCTTTGGATCTTGCTCACAACAATCTAGAGGGTCCTTTGCCACTGCAGCTGTCAAACTGTACCCAAATGTATATATTTGATGTGGGATTCAATTTCCTTAATGGTTCATTCCCATCAAGCATGAGGAGCTGGACAAGATTAACCACATTAGTTTTAAGGGAGAACCGCTTTAGCGGGGATATCCCATCGTTCTTATCAGAATATGTCCAGCTTAATGAGCTACAACTTGGAGGAAATATGTTCGAGGGGAAAATTCCTAAATCAATTGGGTCACTGCAGAATCTCATATATGGATTGAATCTGAGTGCTAATAAATTAACGGGTGACATTCCCTTTGAAATTGAGAAGTTGCAGAAGCTGGAAAGCCTGGATTTGTCCCACAACAATCTGACAGGGAGCATACATGTTCTTGGTGAACTTTCTTCATTAACAGTAATCGATATATCATACAACTCCTTTGTCGGTGCTTTGCCAGAGTGGAATATGAAGTATCTGAATTTGCTGCCAACATCATTCATGGGAAACCCTGATTTATGTGTCCGTTGTTCAAGCTCAAACGCCTCCACTTGCAAGAAATATAGCTTCTTGAAACCATGTGTTTCTGAATCAAGTGATCACAAAGGCAATAAACGTCCATTCTTATTTATAGTACTAGGATGTGTAGTGTTTGCTATTTTCCTGTCAGTTTTACTGATAATATATTATCACCATTATGGCCAACAATCTGAGGAGGAGGTCTTTCATGATCAAGTTGTCTCCCTCAATGATGGATCTACGATGAGGGGGAATGCTGATTGGGAAGAGCAAGAGTTTATTGATTCAAATGGCAAAGGAGAATTCAAAATTATTGACCTCAGAAATGCTACAGAAAATCTACATGCTCGATTTATAATTGGCCTAGGAGGGCAAGGAATTGTCTATAAAGCTGATCTTGATTTTGGAGTTTTTGCTGTTAAGAAGGTTAAATTTTCACAGAACAATAGGAGGAAATTGAACATGATTAAAGAAATAGAAATAACAAAGAAGATTAGGCATCAAAATGTGGCAAGATGCTTAGGCTTCTGGATTGGTGAGGAATTCGGTTTAACCATAAGCACTTACAGGGAAAATGGAAGCCTTCACGATGTTTTGCATGGAAGCAGTCCACAACCATGCTTAGCTTGGAATATCCGCTATAAGATTGCTATAGGAATTGCAAAAGGACTAGCATATCTTCATCACAGCTGTGATCCTCCCATATTGCATCGAGACATCAAACCAAAGAATATACTTCTTGACTCTAATATGCATCCTTATATTACTGATTTTGGTATTTCCATTGCTTTGAATCGGTCATCTACTGTGTTGCGTTTGCGGTCAACATATTATCTAGGTACACCCGGTTTTATGGCACCAGTCGTTAAGAGATTGCCTATGAGGCAGAGCCAAGCAATTTTGGTTCAAGATGACAAAGCTTCATTTCATTTGGGATATTCCCTTACTAGTGCTGCAGCCTCTTCATTTTTTCAGTTTCACCCTAGATTTGTGCAAGAGCCTGTTTCTATGACCAGAGCCCAAATGGCAACTTTGTCTAAGGAAGAAGTCAAGATCCGTGCCAATGAAGATTCTTTATCTGGTCTTCATGAAATGGAAGCTAGTGCACATCCAAACAATCCAAATATCAGCCGCAGAGGAACTCCTAGCATTAAAGAAGCTTCAGATTTAGAAGTTGCTGTAAAGAAGGTTATGTTTGCTAGGAACTTAGGCAATATCTTAAGTGCAGAGAGAGAAGCAAAGATACTAGGAATGGCTAAGCACGGAAATATAGATAACATGTGTGAGGATTGGAGCTCAGAGGATGAAAGTGCAGACCAGAACAACTGCTTCTCGTTACCAATTAGCCTACATGAGTTTTTGCATGAAAAGAGTCCACATCCATTGCTGAAGTGGAATCAATTGGTAGGTTTTGAATTCAAACTCAAAAGTAGTACTCGAACGAGTCAAGAAAGACAAAGTGCTCGCCCTGTTGGCTCTGAGATGCATCCAGACGAATGCTTGCTTAATAATGTCTATAACAAAATAATGAAGGAATTAAAAGATTCAAGAAATAGATAA 3156 0.3916 MKLLLFILFLFAPFYVTSSLSLNGLTLLSLLNHWTSVPPSLNSSWKSSDSTPCSWPGIQCNRYQNVVLLNLTASQIVGQVGPEIGRLTHLQKLLLASNGFSGTIPSELGNCSMLEYIDLSDNDLSGNIPPEIGNCKSLKSLHLHFNQLEGEIPNELGRLNKLKDLELHSNHLTSEIPHAIWKIQSLKHVLLHNNRLFGMLPLELTELKHVENISLAENQLFGSIPQGLGINSSLVRLDLVYNKFTGYIPPNLCFGKQLRLLSLGFNQLKGGIPHDIGRCATLGRLVLNGSKLSGYIPDFEGNQNLIYMDISNNSFSGAIPSSLGNCKNLTALILSTNDITGHIPSELGNLVDLQALDLAHNNLEGPLPLQLSNCTQMYIFDVGFNFLNGSFPSSMRSWTRLTTLVLRENRFSGDIPSFLSEYVQLNELQLGGNMFEGKIPKSIGSLQNLIYGLNLSANKLTGDIPFEIEKLQKLESLDLSHNNLTGSIHVLGELSSLTVIDISYNSFVGALPEWNMKYLNLLPTSFMGNPDLCVRCSSSNASTCKKYSFLKPCVSESSDHKGNKRPFLFIVLGCVVFAIFLSVLLIIYYHHYGQQSEEEVFHDQVVSLNDGSTMRGNADWEEQEFIDSNGKGEFKIIDLRNATENLHARFIIGLGGQGIVYKADLDFGVFAVKKVKFSQNNRRKLNMIKEIEITKKIRHQNVARCLGFWIGEEFGLTISTYRENGSLHDVLHGSSPQPCLAWNIRYKIAIGIAKGLAYLHHSCDPPILHRDIKPKNILLDSNMHPYITDFGISIALNRSSTVLRLRSTYYLGTPGFMAPVVKRLPMRQSQAILVQDDKASFHLGYSLTSAAASSFFQFHPRFVQEPVSMTRAQMATLSKEEVKIRANEDSLSGLHEMEASAHPNNPNISRRGTPSIKEASDLEVAVKKVMFARNLGNILSAEREAKILGMAKHGNIDNMCEDWSSEDESADQNNCFSLPISLHEFLHEKSPHPLLKWNQLVGFEFKLKSSTRTSQERQSARPVGSEMHPDECLLNNVYNKIMKELKDSRNR 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0194 1051 Pfam Leucine rich repeat 304 363 IPR001611 GO:0005515
Mibi04g0194 1051 Pfam Leucine rich repeat 453 506 IPR001611 GO:0005515
Mibi04g0194 1051 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 57 256 - -
Mibi04g0194 1051 ProSitePatterns Serine/Threonine protein kinases active-site signature. 767 779 IPR008271 GO:0004672|GO:0006468
Mibi04g0194 1051 Gene3D Ribonuclease Inhibitor 25 132 IPR032675 -
Mibi04g0194 1051 SMART serkin_6 646 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0194 1051 SUPERFAMILY L domain-like 23 299 - -
Mibi04g0194 1051 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 257 542 - -
Mibi04g0194 1051 Gene3D Ribonuclease Inhibitor 211 544 IPR032675 -
Mibi04g0194 1051 FunFam Os07g0541700 protein 723 808 - -
Mibi04g0194 1051 Pfam Protein kinase domain 651 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0194 1051 SMART LRR_typ_2 159 183 IPR003591 -
Mibi04g0194 1051 SMART LRR_typ_2 87 111 IPR003591 -
Mibi04g0194 1051 SMART LRR_typ_2 350 374 IPR003591 -
Mibi04g0194 1051 SMART LRR_typ_2 471 494 IPR003591 -
Mibi04g0194 1051 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 141 819 - -
Mibi04g0194 1051 Gene3D Transferase(Phosphotransferase) domain 1 634 831 - -
Mibi04g0194 1051 SUPERFAMILY L domain-like 279 533 - -
Mibi04g0194 1051 Pfam Leucine rich repeat N-terminal domain 25 61 IPR013210 -
Mibi04g0194 1051 SUPERFAMILY Protein kinase-like (PK-like) 633 821 IPR011009 -
Mibi04g0194 1051 PRINTS Leucine-rich repeat signature 471 484 - -
Mibi04g0194 1051 PRINTS Leucine-rich repeat signature 114 127 - -
Mibi04g0194 1051 Gene3D Ribonuclease Inhibitor 133 210 IPR032675 -
Mibi04g0194 1051 ProSiteProfiles Leucine-rich repeat profile. 473 495 IPR001611 GO:0005515
Mibi04g0194 1051 ProSiteProfiles Protein kinase domain profile. 646 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0194 Mibi-ChrMibi04 3443172 3448579 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0194 64 819 Receptor kinase-like Gene Family AT1G73080 44.063 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi04g0194 Pkinase 8.1e-30 CL0016