Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0126 ATGCCACTAAATTACTTCCACGAGCCACAATTAAACTCATCTGCTTTCAATGCTTCTCCTCCTCCCATTTTCTCTATGCTGAACCATTCTGAAGCTTTTGATGTGAACTTACTCCCTATTCTGGCCTATAATCTGCTGCTGTGGTGGAAGCAGCATATATTAGACATGACGAGAGTTCAAAGCTGGAACGCGATATTACTAATGACTTGTGTGATGGCACTGCTTAAGTGGCATCCAAACATGCCCATTGATGGCAAGCGAAAATGCCTGGTTTTGGATAGGCCTTTGAAGATTATAACTTGTGCTCTTCGCACATTCCTTGATCTTATCTACATTATTCTCCATATAACCTTTCAGTTTCGAATGGGTTTTATTGCCCCTTCGTCTCGAGTAGTTGGTGGGAGTGAGCTCAATGATGATCGCGATGCTACTGCCAATTATTGGAAAAAGAAAAACGCTATTGCAAATTATTGGCTAAAGAAATATTGGCAAATGAAAAGGGCTATTGCAAATTATTGGCAAAAGACAAAGGCTATTGCAAAAAGATACTTATCTTCATATTTCATCATTGACATCCTCTCGATTATTCCACTTCCCCAGGTGTTTGTTTTAGTTCTTCCATTATTAGAAAATGAGTGTTTAAAGTATATGATAATAGTCCAGTATGTGCCAAGAATTGTTCGGATCTATCCTTTCTTCAGAGAAGTAACAAAAAATGCTGGCATACTTTCTGAGAAAGCATGGGCTGCTGCAGCTTTTAATCTCCTTCTCTATATGCTTGCAAGCCATGTGGTTGGCTCTGCCTGGTACCTACTTTCAGTGGAATCAAAGATTCGATGTTGGAGACAAGAATTGAAGAACGCTAATTTCTTTGCAACTACTTACATGAGTTGTAGACACCATAATCCAAATGCCTTGTTACTTCTCAATAGTTCTTGCCCCTTGAGAAATCCTGATGAGATTGACGACCCAGGTGTCTTCAATTTTGGAATATTTGTCAATGCTCTAAGATCTCATGTGGTGCAATCAAATACCAACTTTCCTCAAAAGATCTTCTATTGCCTTTGGTGGGGTCTGCGCAATGTGAGTTCTCTCGGGCAAAACCTCAATACTAGCACATTTATTGAGGAAATACTCTTCACTATCTTCATTTCCATCTTTGGGTTGATTTTATTCGCGTTACTCATTGGAAACATGCAGAAATATCTGCAATCCATGCAATCTACGGCCGTGAGAGCTGAAGAAATGAGAGTGAACAGACAGAATATAGAGAAATGGATGTCCCAGCGTATGTTGCCAGAGAACTTGAAGGAAAGAGTTAGACGATATGAACATTACAAATGGCAAAAACATGAGGGTGTGGATGAGGAAACATTAATGCGCAATCTACCTAAAGATCTCAGAAGAGACATAAAGCGGCACCTTTGCTTGGATTTGCTTAGAAATGTGCCAATGTTTGAGATAATGGATGAGCAGTTGTTGGATGCACTATGTGATGGACTGAAACCAGTACTTTATACAGAGAAAAGCTACATTGTTCGTGAAGGAGATCCGGTTGATCAAATGTTATTCATTATGAGAGGAAAACTTGCAACTATGACGACAAATGGTGAAAGAACAGGTTTTTTCTACTCCTTTGTGATCAAGGCAGGTGATTTCTGTGGAGAGGAGCTTTTAACATGGGCCTTGGACCCCAACTCATCCCCAAATCTTCCCATTTCAACCAGAACAGTGGAATCTATATCAGAAGTTGAAGCCTTTGCTCTCATGGCTAATGACTTAAAGCTTGTTGCTTCCCAATTTCGACACCTTCACAATAAACACATCCTGCACGCTTTCAGGTATTATTCCTTGCAATGGAGGACATGGGCTGCGCGTTTCATACAAGTAGCTTGGCGACGCCATTGTAAAAGGAAGATTGAGAAAGCTTTACGTGAAGCAGAAGATAGGCTGCAAGATGCTTTGGCGAAAAAGGAAGGTTCTTCTGTAAGTTTTGGTGCCACCATTTATGCAGCAAGGTTTGCTGCCAATGCCTTACACAACCTCCGAAAAAATAATGTAGAACGACAGAACAACAGAATGCCTCAGAGATTGCTGCCTCTCCTGCCTCAGAAGCCAACTGAGCCTGATTTCATCTTTCAGGGCCAAAAAGAAAAAGAAAGAGAATAA 2169 0.4062 MPLNYFHEPQLNSSAFNASPPPIFSMLNHSEAFDVNLLPILAYNLLLWWKQHILDMTRVQSWNAILLMTCVMALLKWHPNMPIDGKRKCLVLDRPLKIITCALRTFLDLIYIILHITFQFRMGFIAPSSRVVGGSELNDDRDATANYWKKKNAIANYWLKKYWQMKRAIANYWQKTKAIAKRYLSSYFIIDILSIIPLPQVFVLVLPLLENECLKYMIIVQYVPRIVRIYPFFREVTKNAGILSEKAWAAAAFNLLLYMLASHVVGSAWYLLSVESKIRCWRQELKNANFFATTYMSCRHHNPNALLLLNSSCPLRNPDEIDDPGVFNFGIFVNALRSHVVQSNTNFPQKIFYCLWWGLRNVSSLGQNLNTSTFIEEILFTIFISIFGLILFALLIGNMQKYLQSMQSTAVRAEEMRVNRQNIEKWMSQRMLPENLKERVRRYEHYKWQKHEGVDEETLMRNLPKDLRRDIKRHLCLDLLRNVPMFEIMDEQLLDALCDGLKPVLYTEKSYIVREGDPVDQMLFIMRGKLATMTTNGERTGFFYSFVIKAGDFCGEELLTWALDPNSSPNLPISTRTVESISEVEAFALMANDLKLVASQFRHLHNKHILHAFRYYSLQWRTWAARFIQVAWRRHCKRKIEKALREAEDRLQDALAKKEGSSVSFGATIYAARFAANALHNLRKNNVERQNNRMPQRLLPLLPQKPTEPDFIFQGQKEKERE 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0126 722 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 49 711 - -
Mibi04g0126 722 Gene3D - 153 407 - -
Mibi04g0126 722 Coils Coil 637 657 - -
Mibi04g0126 722 Pfam Ion transport protein 65 409 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mibi04g0126 722 FunFam Cyclic nucleotide-gated ion channel 1 412 476 - -
Mibi04g0126 722 Gene3D Jelly Rolls 483 603 IPR014710 -
Mibi04g0126 722 SUPERFAMILY Voltage-gated potassium channels 178 407 - -
Mibi04g0126 722 FunFam Cyclic nucleotide-gated ion channel 1 483 601 - -
Mibi04g0126 722 SUPERFAMILY cAMP-binding domain-like 414 607 IPR018490 -
Mibi04g0126 722 CDD CAP_ED 485 616 IPR000595 -
Mibi04g0126 722 SMART cnmp_10 485 616 IPR000595 -
Mibi04g0126 722 Gene3D Helix hairpin bin 411 476 - -
Mibi04g0126 722 ProSiteProfiles cAMP/cGMP binding motif profile. 485 568 IPR000595 -
Mibi04g0126 722 MobiDBLite consensus disorder prediction 688 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0126 Mibi-ChrMibi04 1656791 1665325 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0126 59 711 Ion Channels AT1G01340 56.166 0.0 747