Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0122 ATGCTCACATATTGTTGGTACTTGCTGTTTAAGCTACTTACAATGATTACATTTCTTTCTAGGTTTAAGGACTGGAGTTCAGAATCATCTTTCAGTGTTGAGAAAACAGTTTCTGTTGATGATGGATATCCTCAGAGAAAAGTTAGACCAAGAATAAGAGATGTGTTAAAGAATATTAGAAGAGGAATTCAGAGTAGGTTTGAGAAGATTAAAAGCTTGAGGAAACCTGTAAATGTGCATCCAGTTAGTGATGCAACTCCCAAGAAATTGGACTCGGAGAGAAAAATTCTTGATCCACAGGGGTCTTTCCTTCAGAAATGGAACAAAATACTTGTGATTGCATGTATACTGGCAGTTTCTGTGGATCCACTGTTCTTTTACACCCCAGTTATTGATGACAGAGAAAAATGCCTTTGTTTCAATAAAAAATTGGAGATTGCTGCGAGTGTTCTCCGTACATTCTTTGACCTCTTCTACATTCTCCACATAACCTTTCAGTTTCGAACAGGTTTTATCGCCCCTTCATCTCGAGTATTTGGTAGGGGTGAGCTCATTGATGATCCTAAGGCTATTGCAAAAAGATACTTATCTTCATATTTCATCATTGACATCCTCTCAATTATTCCACTTCCACAGGCGGTTGTTTTCTTAAGGAGACATAGAGTTCCATCTGTAGAAAAGGACTTGTTAAAATATACAATATTAATCCAATATGTCCCAAGATTTCTTCGGATCTATCCATTGTTCACAGAAGTAACTAGAACTTCTGGCATACTGACTGAGACAGCATGGGCCGGCGCTGCTTATAATCTCTTTCTCTATATGCTAGCAAGTCATGTGGTTGGAGCTTTCTGGTATCTGTTTTCACTAGAATCAGAGCTTCGGTGCTGGCACAGAGAATTGAGGAGTGCTAAAATGCCTACAAACATAGGCTGTCCATCCAGGGATTTGAATGTCAAAAGACTTCTCTATGATTCTTGTCCCTTCAAGGATCCTGACGACATTGACGACCCCAATGTCTTCAATTTTGGAATGTATACCGACGCTTTAAAATCTCGTGTGGTAGAAAAAACAAAGGATTTTTCTCAAAAGATCTTCTTCTGCTTTTGGTGGGGTTTGCGCAATGTAAGTTCTCTGGGACAAAATCTCAAGACAAGTACATATGTCGGGGAGATCATATTTGCTTGCTTAATCGCAATCTTTGGGTTGGTTTTGTTCTCGTTACTCATTGGAAACATGCAGAAATATCTTCAATCTGTAACTGTTAGAGTTGAAGAAATGAGAATCAAGAGGAGGGATGCAGAGCGGTGGATGTCCCACCGTATGCTACCTGAGCACTTGAGGGCAAGAATCAGACGTTATGAGCAGTACAAATGGCAAGAAAACAGGGGTGTGGATGAGGAAACATTAATCCATAATCTTCCTAAAGATCTCAGAAGAGACATAAAACGTCACCTTTGCTTGGATTTACTCAAAAAAGTGCCAATGTTTGAGACAATGGATGAGCAGTTGTTGGATGCACTATGTGATGGACTGAAACCAGTACTTTATACAGAGAAAAGCTACATTGTTCGTGAAGGAGATCCGGTTGATCAAATGTTATTCATTATGAGAGGAAACCTTGCAACTATGACGACAAATGGTGGAAGAACAGGTTTTTTCAACTCCTTTGTGATCAAGGCAGGTGACTTCTGTGGAGAGGAGCTTTTAACATGGGCCTTGGACCCCAACTCATCCCCAAATCTTCCCATTTCAACTAGAACAGTGGAATCTATATCAGAAGTTGAAGCCTTTGCTCTCATGGCTAATGACTTGAAGCTTGTTGCTTCCCAATTTCGACGCCTTCACAATAAACACATCCAGCACGCTTTCAGGTATTATTCCTTGCAATGGAGGACATGGGCTGCGTGTTTCATACAAGCAGCTTGGCGACGCCATTGTAAAAGGAAGATTGAGAAAGCTTTACGTGAAGCAGAAGACAGGCTGCAAGATGCTTTGGCAAAAGAGGAAGGTTCTTCTGTAAGTTTTGGTGCCACCATTTATGCAGCAAGGTTTGCTGCCAATGCCTTACGCAGCCTCCGAAAAAATAATGGAGAACGAAAAAACAACAGAAAGCCTCAGAGATTGCCGCCTCTCCTGCCTCAGAAGCCAACTGAGCCTGATTTCACTACACAAGCTTCAGGACTCTCTTAG 2193 0.4099 MLTYCWYLLFKLLTMITFLSRFKDWSSESSFSVEKTVSVDDGYPQRKVRPRIRDVLKNIRRGIQSRFEKIKSLRKPVNVHPVSDATPKKLDSERKILDPQGSFLQKWNKILVIACILAVSVDPLFFYTPVIDDREKCLCFNKKLEIAASVLRTFFDLFYILHITFQFRTGFIAPSSRVFGRGELIDDPKAIAKRYLSSYFIIDILSIIPLPQAVVFLRRHRVPSVEKDLLKYTILIQYVPRFLRIYPLFTEVTRTSGILTETAWAGAAYNLFLYMLASHVVGAFWYLFSLESELRCWHRELRSAKMPTNIGCPSRDLNVKRLLYDSCPFKDPDDIDDPNVFNFGMYTDALKSRVVEKTKDFSQKIFFCFWWGLRNVSSLGQNLKTSTYVGEIIFACLIAIFGLVLFSLLIGNMQKYLQSVTVRVEEMRIKRRDAERWMSHRMLPEHLRARIRRYEQYKWQENRGVDEETLIHNLPKDLRRDIKRHLCLDLLKKVPMFETMDEQLLDALCDGLKPVLYTEKSYIVREGDPVDQMLFIMRGNLATMTTNGGRTGFFNSFVIKAGDFCGEELLTWALDPNSSPNLPISTRTVESISEVEAFALMANDLKLVASQFRRLHNKHIQHAFRYYSLQWRTWAACFIQAAWRRHCKRKIEKALREAEDRLQDALAKEEGSSVSFGATIYAARFAANALRSLRKNNGERKNNRKPQRLPPLLPQKPTEPDFTTQASGLS 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0122 730 SUPERFAMILY Voltage-gated potassium channels 98 418 - -
Mibi04g0122 730 Gene3D - 109 422 - -
Mibi04g0122 730 SMART cnmp_10 496 627 IPR000595 -
Mibi04g0122 730 FunFam Cyclic nucleotide-gated ion channel 1 423 487 - -
Mibi04g0122 730 Gene3D Helix hairpin bin 423 487 - -
Mibi04g0122 730 FunFam Cyclic nucleotide-gated ion channel 1 494 612 - -
Mibi04g0122 730 SUPERFAMILY cAMP-binding domain-like 425 622 IPR018490 -
Mibi04g0122 730 Pfam Ion transport protein 107 424 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mibi04g0122 730 Coils Coil 648 668 - -
Mibi04g0122 730 ProSiteProfiles IQ motif profile. 632 661 IPR000048 GO:0005515
Mibi04g0122 730 ProSiteProfiles cAMP/cGMP binding motif profile. 496 579 IPR000595 -
Mibi04g0122 730 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 85 722 - -
Mibi04g0122 730 MobiDBLite consensus disorder prediction 693 730 - -
Mibi04g0122 730 CDD CAP_ED 496 627 IPR000595 -
Mibi04g0122 730 Gene3D Jelly Rolls 494 614 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0122 Mibi-ChrMibi04 1611357 1616532 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0122 21 724 Ion Channels AT5G53130 63.776 0.0 907