Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0121 ATGAAGCATTCCATGGCTCCAAAGGTTCCATTGGCTCCGATTCAGAATGGAAATCATCCAATGCCTGCCAACAGCCTACCTATGGGATATCCAGTGTTGCAGCAGCCTCCCAATATAGCAACAGGTCAACCACATCTTGACTCCATGGGTTCTGGGATATCAAATTGTCACGTGGTCAACGGAGTCCCTGCTCCTAGCTATTTTAATTCCATTCAGATGAATTCTGGGAATGATGCTCCTGATATGGCTCCTGTTATTCCATCAATTAACTCAATGTCACCAATGTCAGAAATGTCTGTGAGTCCTACATCAGTTGCATCCAGTGGTCGTTTCTCTTTTACTGCATCAGATTTATTAGGAATAAACACACATGCAACAACTCTGGATACAGCCTTTGCATCTGAAGTAGCCAGTCCAGCAGGACTGCAACTTGCAGCAGACAGAAACACCGCGATTTCCAGATCGCCTGATCAAATTCCGTGGAATTTTAGTCTATCCGATCTAACTGCCGATTTGTCTAACTTGGGAGATCTAGGAGCCCTTGGCAACTATCTTGGTTCACCGTTTTTGCCATCTGATTCAGAAATGCTGTTTGAATCTTCAGATCAAGATATAAATAATGGGTGGAAGCAGCATATATTCGACATGATGAGAGTTCAAAGCTGGAACAAGATATTACTAATGACTTGTGTGATGGCACTGCTTGTTGATCCAATATTCTTTTACATCCCAGAGATTGATGGCAAGCGAAAATGCCTTGTTTTGGATAGGTCTTTGAAGATTATAACTTGTGTTCTTCGCACATTCCTTGATCTTTTCTACATTATTCTCCACCTAATACTTCAGTTTCGAGCTGGTTACATCGCCCCTGATGATCCCAAGTCTAATGCAAAAAGATACTCATCATCCAAATTCGTCATTGACATTCTATCAATTATTCCACTTCCCCAGGTGTTTGTTTTAGTTCTTCCATTACTAGAAAATGGGTGTTTCAAGTATATGATATTAGTTCAGTATGTGCCAAGAATTGTTCGGATCTGTCCTTTCTTCAGAGAAGTAACAAAAACTGCTGGCTTACTTTCTGATAAAGCATGGGCTGCTGCGCATGCTGCTTATAATCTCCTTCTCTATATGCTTGCAAGCCATGTGGTTGGCTCTGTCTGGTACCTACTTTCAGTGGAATCAGAGATTCGATGTTGGAGACAAGAATTGAAGAATGCTAATCTCTTTGCAACTACATACATGAGCTGTAGACACCATAATCCAAATGCCTTCATACTTCTCAATAGTTCTTGCCCCTTGAGAAATCCTGATGAGATTGACGACCCAAGTGTCTTTAATTTTGGAATATTCATTGATGCTTTAAGATCTCGTGTGGTGGAATTAACGACCAATTTTCCTCAAAAGATCTTCTATTGCCTTTGGTGGGGTCTGCGCAATGTGAGTTCTCTCGGGCAAAACCTCAATACTAGCACATTTATTGAGGAAATATTCTTCACAATCTTCATTTCCATCTTCGGGTTGATTTTATTCGCGTTACTCATTGGAAACATGCAGAAATACTTGCAATCCATGCAATCTACCGCTGTGAGAGCTGAAGAAATGAGAGTGAACAGACAGAATATAGAGAAATGGATGTCCCAGCGTATGCTGCCAGAGAACTTGAGGGAAAGAATTAGACGATATGAACATTACAAATGGAAAAAACATGAGGGTGTGGATGAGGAAACATTAATGCGCAATCTTCCTGAGCATCTCACAAAATACATTAAGCGCCACCTTTTCTTGGATTTAATTAAAAGAGTGCCATTTTTTGGGGCAATGGATGATCAGTTGTTGGATGCACTTTGTGATAAGCTGAAGCCAGTACTTTATACGGAGAAGAGCGACATTATTCATGAAGGAGATCCAGTGGATCGAATGATATTCGTTATGCGGGGAAGCCTTGCAAAGAAGACAAAACATTGTGGGGGAACTGGTTTTTTAAACCTCCAGATCAAGGCAGGTGACTTCTGTGGAGAGGAGATTTTAACATGGGCCTTGGACCCCAAGTCATCCTCAAATCTTCCCATTTCAACCAGAACAGTGGAATCTATATCAGAAGTTGAAGCCTTAGCTCTCATGGCTAATGATTTGAAGTGTGTTGCTTCCCAATTTCGACGCCTTCACAATAAACACATCCAGCACGCTTTCAGATACATCCAGCACACTTTCAGGTTCTATTCCATGCAATGGAGAACATGGGCTGCATGTTTCATACAAGCAGCTTGGCGTCGCTATATCAGGATGAAGTCTAAAAAATCAAAAGCTTCTGCAGATCATGAACAAGGCTCATCATCAAGAAGGCCAAATGATGAGCCAGACAACCGATTTCAGTACCTTGAAATTAAAGTAATTTAG 2400 0.4125 MKHSMAPKVPLAPIQNGNHPMPANSLPMGYPVLQQPPNIATGQPHLDSMGSGISNCHVVNGVPAPSYFNSIQMNSGNDAPDMAPVIPSINSMSPMSEMSVSPTSVASSGRFSFTASDLLGINTHATTLDTAFASEVASPAGLQLAADRNTAISRSPDQIPWNFSLSDLTADLSNLGDLGALGNYLGSPFLPSDSEMLFESSDQDINNGWKQHIFDMMRVQSWNKILLMTCVMALLVDPIFFYIPEIDGKRKCLVLDRSLKIITCVLRTFLDLFYIILHLILQFRAGYIAPDDPKSNAKRYSSSKFVIDILSIIPLPQVFVLVLPLLENGCFKYMILVQYVPRIVRICPFFREVTKTAGLLSDKAWAAAHAAYNLLLYMLASHVVGSVWYLLSVESEIRCWRQELKNANLFATTYMSCRHHNPNAFILLNSSCPLRNPDEIDDPSVFNFGIFIDALRSRVVELTTNFPQKIFYCLWWGLRNVSSLGQNLNTSTFIEEIFFTIFISIFGLILFALLIGNMQKYLQSMQSTAVRAEEMRVNRQNIEKWMSQRMLPENLRERIRRYEHYKWKKHEGVDEETLMRNLPEHLTKYIKRHLFLDLIKRVPFFGAMDDQLLDALCDKLKPVLYTEKSDIIHEGDPVDRMIFVMRGSLAKKTKHCGGTGFLNLQIKAGDFCGEEILTWALDPKSSSNLPISTRTVESISEVEALALMANDLKCVASQFRRLHNKHIQHAFRYIQHTFRFYSMQWRTWAACFIQAAWRRYIRMKSKKSKASADHEQGSSSRRPNDEPDNRFQYLEIKVI 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0121 799 Gene3D - 223 526 - -
Mibi04g0121 799 ProSiteProfiles cAMP/cGMP binding motif profile. 604 687 IPR000595 -
Mibi04g0121 799 Gene3D Jelly Rolls 602 721 IPR014710 -
Mibi04g0121 799 SMART cnmp_10 604 734 IPR000595 -
Mibi04g0121 799 MobiDBLite consensus disorder prediction 766 789 - -
Mibi04g0121 799 Pfam Ion transport protein 220 528 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mibi04g0121 799 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 207 771 - -
Mibi04g0121 799 SUPERFAMILY cAMP-binding domain-like 533 732 IPR018490 -
Mibi04g0121 799 CDD CAP_ED 604 734 IPR000595 -
Mibi04g0121 799 SUPERFAMILY Voltage-gated potassium channels 219 526 - -
Mibi04g0121 799 Gene3D Helix hairpin bin 527 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0121 Mibi-ChrMibi04 1594007 1603599 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0121 219 768 Ion Channels AT1G01340 56.316 0.0 649