Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0105 ATGGGAGAGACCGGGAAGTGGGAACAACTTAGTCTGATAAGTGAGCTAATCCAAGGGAAGGAATTTGCAGAGCAGCTCTGTTCCCGTCTTTCTTCTTCATCATCGCTTAAAGAGAAAGAGCTCTTAGTTGAAAAGATTCTTTCTTCCTATGAGAAAGCTCTCTCCCTGCTTAATGTGGGAGAGAATGACGTCATCAATGGCAGGATGATGATGGACTCTCTCTGTTCTCTTATTGGTGGGAGCCCCAGGAGTGAGGTGTCTGACCAAGATTTTAACCACAAGGATTCCATCAAGAAAAGAAAGATGATGCCTAGATGGACAAAGCAAGTGAAGGATTGCCCAGGAACAGGCCTTGAAGGTTCTCTGGATGATGGTTATAGTTGGAGAAAATATGGGCAGAAAGATATTCTAGGATCTAAGTTTCCAAGAGGATATTACAGATGTACACACAGAAATGTGCAAGGTTGTCTCGCTACAAAACAAGTTCAAAGATCTGATGATGATCCAACCATTCTTGAGATAACTTACAGAGGAAGACACACATGCACACAAGCATCTCATGTGAAGAAGACATTGCCATTAAAAAGAAAAGTGGGTTTGATGGAAAATCCAATGCAGAAGCATCAAGATGATGATGATCATATACCACTATTGGAATTAAACCCAGAAGCGTTTTTAAATGTTGGAGCAGATGTTGAAGTTAAAACTGAGAAAATGGATCCAAAGGAAGAGATTTTCCATCCCTTCTGCTTCCTTTCTGCCCTTGAGAAAGAAGAAAACTTATTATTTTCTGAACCAATCGTGGAAAACCATGTCTTCCTGGAAAGCATGTCTTCTCCTAAGTTTATCTCACCAGAAACCTCAGAATCAAATATTTTCTGTCTCAATGTGCAGACTTCAGAATCTGATGTCACTGACACAGTTTCAGCTCCAACTTCAGTCACAAATTCCCCAATAGCTGATTTGGATCTCATAGATTTTGACAATTTCCATTACAACATTTCAGAACTATTTTCTTCATAG 1023 0.3998 MGETGKWEQLSLISELIQGKEFAEQLCSRLSSSSSLKEKELLVEKILSSYEKALSLLNVGENDVINGRMMMDSLCSLIGGSPRSEVSDQDFNHKDSIKKRKMMPRWTKQVKDCPGTGLEGSLDDGYSWRKYGQKDILGSKFPRGYYRCTHRNVQGCLATKQVQRSDDDPTILEITYRGRHTCTQASHVKKTLPLKRKVGLMENPMQKHQDDDDHIPLLELNPEAFLNVGADVEVKTEKMDPKEEIFHPFCFLSALEKEENLLFSEPIVENHVFLESMSSPKFISPETSESNIFCLNVQTSESDVTDTVSAPTSVTNSPIADLDLIDFDNFHYNISELFSS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0105 340 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 6 271 IPR044810 GO:0003700
Mibi04g0105 340 FunFam WRKY transcription factor 53 108 185 - -
Mibi04g0105 340 SMART WRKY_cls 122 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi04g0105 340 Pfam WRKY DNA -binding domain 123 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi04g0105 340 Gene3D WRKY domain 116 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi04g0105 340 ProSiteProfiles WRKY domain profile. 117 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi04g0105 340 SUPERFAMILY WRKY DNA-binding domain 121 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0105 Mibi-ChrMibi04 1379840 1381757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0105 4 212 WRKY Transcription Factor Family AT5G24110 48.357 4.42e-58 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi04g0105 WRKY 1.7e-27 CL0274