Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0088 ATGGGAAACAGTGAGGAAGGGAAATCAACTAGAACTGAAAAACCTTCTTCACCTGTAGCAGTGGACCAGGCTAATCAGGGCAGCCAGGCCAATGTTCATGTCTATCCTGACTGGGCTGCCATGCAGGCATATTATGGGCCAAGAGTCTCCATGCCACCATACTACAACCCAGCTGTGAGCTCTGGTCACCCTCACCCATACATGTGGCCGCCACAGCCCATGTTGCCGCCACCATATGGGACTCCTTATGCTGCAATCTATTCACATGGAGGTGTTTATCCTCACCCTGCGATTCCTATCGGGCCACAATCACATGGTCAAGGAGTTCCAACCTCGCCTGCAGCTGCCACTCCTTTGAACATGGAGACACCAACGAAATCTCCTGGAAACACTGATCAGGGTTTAATGAAGAAATTGAAGGGATTCGATGGGCTCGCAATGTCTATTGGAAATGGCAATGCTGAAAGTGCTGATCATGGAGCAGAAAACAGGCTGTCACAGAGTTTGGATACTGAGAGTTACAGTGATGGAAGTGACAGCAACTCTGCAGGGGCTAATCAAGCAAGAAGGAAAAGAAGCCGAGAGGGAACACCAACTACTGATGGAGATGTCAAATCTGGGAAACAAGCAAATTCAGTTTCCAAAGCAGCTGGAGCCTCCAATAAGATGACAACAGCGTTGGAGCTGAGGAACCCATCCATTCTTGCTAAGACAAATTCCAACTCCCCAAGTAATCCACAGCCCTGTGCAGTTGTGCCTCCTGAAGCTTGGATGCAGAATGAACGTGAGCTGAAACGGGAGAGGAGAAAGCAATCAAATCGAGAATCTGCTAGAAGGTCCCGGTTAAGAAAGCAGGCTGAGACTGAAGAACTCGCACGAAAAGTTGAATCCTTGACATCTGAGAATATCACACTGAAATCAGAAATAAATCGATTGACTGAAAATTCAGGGAAGCTTAGGATGGAGAATGAGACATTAATGGAAAAACTGAAAAATGCGCGAGGAGAAAAGGATGAAATCATTTTGACCCCGAGCACAGAAAATTTGCTATCCAGGGTTAACAATTCCAGTTCTTGTGACAATAGAACTATAGAAGGTGAGAAGAAGCCAAACTCAGGAGCAAAGCTGCATCAACTTTTAGACACGAGTCCTAGAACTGATGCTGTGGCAGCTGGCTGA 1179 0.4682 MGNSEEGKSTRTEKPSSPVAVDQANQGSQANVHVYPDWAAMQAYYGPRVSMPPYYNPAVSSGHPHPYMWPPQPMLPPPYGTPYAAIYSHGGVYPHPAIPIGPQSHGQGVPTSPAAATPLNMETPTKSPGNTDQGLMKKLKGFDGLAMSIGNGNAESADHGAENRLSQSLDTESYSDGSDSNSAGANQARRKRSREGTPTTDGDVKSGKQANSVSKAAGASNKMTTALELRNPSILAKTNSNSPSNPQPCAVVPPEAWMQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTSENITLKSEINRLTENSGKLRMENETLMEKLKNARGEKDEIILTPSTENLLSRVNNSSSCDNRTIEGEKKPNSGAKLHQLLDTSPRTDAVAAG 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0088 392 MobiDBLite consensus disorder prediction 150 300 - -
Mibi04g0088 392 MobiDBLite consensus disorder prediction 259 296 - -
Mibi04g0088 392 MobiDBLite consensus disorder prediction 202 246 - -
Mibi04g0088 392 Pfam G-box binding protein MFMR 1 99 IPR012900 -
Mibi04g0088 392 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 263 326 IPR004827 GO:0003700|GO:0006355
Mibi04g0088 392 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 268 283 IPR004827 GO:0003700|GO:0006355
Mibi04g0088 392 FunFam G-box binding factor 3 264 319 - -
Mibi04g0088 392 MobiDBLite consensus disorder prediction 351 392 - -
Mibi04g0088 392 MobiDBLite consensus disorder prediction 105 132 - -
Mibi04g0088 392 Gene3D - 264 316 - -
Mibi04g0088 392 MobiDBLite consensus disorder prediction 104 136 - -
Mibi04g0088 392 Pfam Disordered region downstream of MFMR 132 222 - -
Mibi04g0088 392 MobiDBLite consensus disorder prediction 160 187 - -
Mibi04g0088 392 MobiDBLite consensus disorder prediction 13 31 - -
Mibi04g0088 392 Pfam bZIP transcription factor 261 324 IPR004827 GO:0003700|GO:0006355
Mibi04g0088 392 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 369 IPR044827 GO:0003700|GO:0006355|GO:0043565
Mibi04g0088 392 Coils Coil 281 343 - -
Mibi04g0088 392 SMART brlzneu 261 325 IPR004827 GO:0003700|GO:0006355
Mibi04g0088 392 SUPERFAMILY Leucine zipper domain 264 319 IPR046347 GO:0003700|GO:0006355
Mibi04g0088 392 MobiDBLite consensus disorder prediction 1 31 - -
Mibi04g0088 392 CDD bZIP_plant_GBF1 266 314 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0088 Mibi-ChrMibi04 1183695 1187302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0088 1 392 bZIP Transcription Factor Family AT2G46270 55.528 2.97e-120 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mibi04g0088 MFMR_assoc 3.1e-14 No_clan