Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0066 ATGGTGTCGTTAAATCCGAACCCAGCTCAAGGTTTCTACTTTTTCGATCCCACCAAGATGGGCCTTCCTGGGGTCGATCCTACGCACCCTCTTCCTCCTCCGCCGCCGCCTCCTTCCTCCGCCGCCAGTGCGCCGCCTTCGTACGGCGAGGATATGAATAAGAAGATCCGAAAACCATACACGATAACCAAGTCTAGGGAGAGCTGGACGGAGCAGGAGCATGACAAGTTTCTCGAAGCTCTTCAATTATTTGACCGTGACTGGAAGAAGATTGAAGCATTTATTGGTTCAAAAACTGTTATCCAGATACGAAGTCATGCACAGAAGTATTTTCTGAAGGTTCAGAAGAATGGAACAAGTGAACATGTGCCTCCCCCTCGGCCAAAAAGGAAGGCTGCTCATCCATACCCTCAAAAGGCACCTAAAAATGCAGCTCCAGCAGTACCACAAGGTACAATGCCATTGCAATCTTCATCTTCTTTTATTGAGCCCCCATATATTTATGGGCCAGGCCCAGACTCATCATCTTCGCTTGGACCTCCAGTTACCAGCGTGCCTTTGTCAAATTGGAATCGCAATGTTATCCAGCCACCCAATGTGCCACAAGTGACTAGAGATGAGATGGGATTGCCGGGGCAAGCTGCTTCTCTAAATTGTGGCTATAGCAGTAGTAATGAGAGCACTCCAAGGGCTTGGCCAAGCAGCAAAGTTATTGATCAAGGGAACTCAGGGAAGCCGATCAAAGTAGTGCCAGATTTTGCACAAGTCTATAGCTTTATTGGTAGTGTGTTTGATCCAAATGAAACAAAGCACTTGGAGAGGCTGAAACAGATGGACCCAATAAATGTGGAAGCAGTATTGTTATTGATGAGAAACCTCTCCATCAATTTAATGAGTCCCAAATTTGAAGATCATAGAAGGTTGCTTTCATCCTACAATCCTGGCTCTTAG 951 0.4658 MVSLNPNPAQGFYFFDPTKMGLPGVDPTHPLPPPPPPPSSAASAPPSYGEDMNKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKNAAPAVPQGTMPLQSSSSFIEPPYIYGPGPDSSSSLGPPVTSVPLSNWNRNVIQPPNVPQVTRDEMGLPGQAASLNCGYSSSNESTPRAWPSSKVIDQGNSGKPIKVVPDFAQVYSFIGSVFDPNETKHLERLKQMDPINVEAVLLLMRNLSINLMSPKFEDHRRLLSSYNPGS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0066 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Mibi04g0066 316 Gene3D - 69 116 - -
Mibi04g0066 316 ProSiteProfiles SANT domain profile. 64 117 IPR017884 -
Mibi04g0066 316 PANTHER SWI/SNF COMPLEX-RELATED 41 298 - -
Mibi04g0066 316 CDD SANT 68 111 IPR001005 -
Mibi04g0066 316 MobiDBLite consensus disorder prediction 164 183 - -
Mibi04g0066 316 FunFam protein REVEILLE 6 isoform X1 68 116 - -
Mibi04g0066 316 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Mibi04g0066 316 SUPERFAMILY Homeodomain-like 60 116 IPR009057 -
Mibi04g0066 316 MobiDBLite consensus disorder prediction 26 43 - -
Mibi04g0066 316 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 64 113 IPR006447 GO:0003677
Mibi04g0066 316 MobiDBLite consensus disorder prediction 115 156 - -
Mibi04g0066 316 SMART sant 65 113 IPR001005 -
Mibi04g0066 316 MobiDBLite consensus disorder prediction 17 59 - -
Mibi04g0066 316 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0066 Mibi-ChrMibi04 808581 812528 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi04g0066 Myb_DNA-binding 5e-11 CL0123