Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0064 ATGGTAAGCCTTGTAATAAAAGCCAACAATTCAGTGCATTTTCCAATTGTCCCCTCTAAACGAACCCAAAAACCCAATCCAGTTTACTCCGGCTGTGAGAAACGCTCAAACACCATTTCTATGGCTACTACTTCGCTTCTCCAGTCCTCAGCATCGTCGTTTCTGGGTCAATTTCGAGTCTTTCCGGCTCCATTGACCTCCGGACTCCTTTACAGAAATGGGAATGGAGGCACGGTGGCGCCGGTGAAGGCCTCTGCTTCTGGGTCTGTGACTGTATTGGTGGAGAAGTCTGAGGCAGAAAAACCCCACCGGCTCAAAATAACTTATAGTGAGAAAATTGTTCCTTTGCTCATGGAAGAATTCAACTACACCAATATACATGAGGTTCCTAAAATTGAGAAGGTTGTGGTTAATTGTGGTATCGGAGATGCTGCGCAGAATGCAAAGGGGTTGGAGGCAGCAATGAATGATCTAGCACTTATCACAGGGCAGAGGCCTGTTAAGACACGAGCCAGGGCTTCAGTTGCCACCTTCAAGATCAGGGAAGGTCAACCCCTTGGGATTGCTGTGACACTCAGAGGAAAAATGATGTTTTCATTCCTAGACCGACTTGTCAACTTGGGGCTTCCTAGGACAAGGGATTTCCAAGGTGTTAACCCAAACAGCTTCGATGGACACGGGAATTACAGCATCGGCATCAAGGACCAGAGCGTATTCCCAGAAATCCGGTCTGATATTGTCAGTAAGCCTAGAGGAATGGATGTGTGTATAACAACAACGGCTAAAACTGATCAAGAAGCAAGCAGATTACTGGTTCTTATGGGCATGCCATTCAGACAGGGAGGTGGTCCTGCTACAACAATCCGCAAGAAGAAGCTCAAGTCTCACCATTTTGATTCAAAATCGAAGGGCAAAGGAAGGAGGTGA 927 0.4682 MVSLVIKANNSVHFPIVPSKRTQKPNPVYSGCEKRSNTISMATTSLLQSSASSFLGQFRVFPAPLTSGLLYRNGNGGTVAPVKASASGSVTVLVEKSEAEKPHRLKITYSEKIVPLLMEEFNYTNIHEVPKIEKVVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARASVATFKIREGQPLGIAVTLRGKMMFSFLDRLVNLGLPRTRDFQGVNPNSFDGHGNYSIGIKDQSVFPEIRSDIVSKPRGMDVCITTTAKTDQEASRLLVLMGMPFRQGGGPATTIRKKKLKSHHFDSKSKGKGRR 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0064 308 Hamap 50S ribosomal protein L5 [rplE]. 102 280 IPR020930 GO:0003735|GO:0005840|GO:0006412
Mibi04g0064 308 MobiDBLite consensus disorder prediction 281 308 - -
Mibi04g0064 308 Pfam Ribosomal protein L5 125 181 IPR031310 -
Mibi04g0064 308 Gene3D - 96 280 IPR022803 -
Mibi04g0064 308 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 108 281 IPR002132 GO:0003735|GO:0005840|GO:0006412
Mibi04g0064 308 Pfam ribosomal L5P family C-terminus 185 278 IPR031309 -
Mibi04g0064 308 ProSitePatterns Ribosomal protein L5 signature. 158 174 IPR020929 GO:0003735|GO:0005840|GO:0006412
Mibi04g0064 308 MobiDBLite consensus disorder prediction 289 308 - -
Mibi04g0064 308 FunFam 50S ribosomal protein L5 100 280 - -
Mibi04g0064 308 SUPERFAMILY RL5-like 104 279 IPR022803 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0064 131 258 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 27.344 1.57e-06 45.8