Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0062 ATGTCGGTGTACGATGCAGCCTTCGTGGATACAGAGCTGTCAAAGAAGACCTCAATCTTCGGTCTCCGACTATGGGTTGTCATAGGAATCCTCGTAGGCTCCATCATCGTGCTCACTCTCTTCCTTCTCTCTCTCTGTCTCACCTCTCGCCGCCAAAGACGCCAAAAGAACCCTCCATCCAACAAAACCCCCGTGGTCTCCAAGGAAATCCAAGAGATCGTACACCTGCCCGCACCGAATCAGAACCCAGTCCCTGAGATCCAGGTGGATTTCGGGAAATCGGAGCACCGGGTCGTGGTTTTCTCTAGTGGGGAGAGTAAAGGTGGGGCCACCGCCACCAGTGTTTGTGAAACGACGTCGTCTTTTGGGAGTGGCAGTATTGGGCCTGAGGTTTCTCATCTTGGGTGGGGCAGATGGTACACTTTGAGGGAGCTTGAGGCTGCTACTAATCATCTTTGTGACGAGAATGTTATTGGGGAAGGTGGCTATGGGATTGTTTACCATGGTGTTCTTGCTGATGGTACCAGAGTTGCAGTGAAGAACCTTTTGAATAACAAGGGTCAAGCTGAGAGAGAGTTTAAAGTAGAGGTAGAGGCGATTGGTCGTGTGCGCCACAAGAATCTTGTTAGGTTGCTTGGCTACTGTGTTGAGGGGGCGTACAGGATGCTCGTGTATGAGTATGTTGATAATGGGAATTTGGAACAGTGGATTCATGGGGATGTTGGAGCTGTCAGCCCTTTGACATGGGATATTCGAATGAACATTATCTTGGGAACTGCTAAGGGATTGGCTTATCTTCATGAAGGTCTTGAACCGAAGGTTGTCCACCGAGATGTGAAATCTAGCAACATACTCCTTAATCGGCAATGGAACGCCAAGGTTTCAGATTTTGGACTTGCTAAACTATTGTGTTCTGAGCGGAGTTATGTCACCACTCGAGTCATGGGGACATTTGGTTATGTTGCTCCAGAATATGCCTGCACTGGTATGTTGACTGAGAAGAGTGATGTCTATAGCTTTGGAATACTTATCATGGAGATAATTACTGGGAGAAGTCCTGTGGATTATAGTAGACCACAAGGAGAGGTAAATCTAGTAGAGTGGTTGAAAACGATGGTTGGGAATCGAAAAGCTGAGGACGTAGTTGATCCGAAGCTCCCTGAGATGCCATCTTCAAAGGCTCTTAAGCGTGCTCTGTTGGTTGCTCTACGATGTGTTGATCCTGACGCAACAAAAAGGCCTAAAATGGGACATGTGATTCATATGCTCGAGGCAGACGACCTTTTGTTCCGTGATGATCGCCAGATTGGGGGAGAATCTTCCAGCTCTCGTCGTGATTTTATAGAAGAGCATAAGGACTCAAATTCTGACAGAAAGCTTGTAGGAAGAGGTATCACTGATCAATCTCAAGATGATTATAGAAGGAATCAGCATCAACCCTCAAGGCAGAGATAA 1455 0.4722 MSVYDAAFVDTELSKKTSIFGLRLWVVIGILVGSIIVLTLFLLSLCLTSRRQRRQKNPPSNKTPVVSKEIQEIVHLPAPNQNPVPEIQVDFGKSEHRVVVFSSGESKGGATATSVCETTSSFGSGSIGPEVSHLGWGRWYTLRELEAATNHLCDENVIGEGGYGIVYHGVLADGTRVAVKNLLNNKGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWIHGDVGAVSPLTWDIRMNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLNRQWNAKVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYSRPQGEVNLVEWLKTMVGNRKAEDVVDPKLPEMPSSKALKRALLVALRCVDPDATKRPKMGHVIHMLEADDLLFRDDRQIGGESSSSRRDFIEEHKDSNSDRKLVGRGITDQSQDDYRRNQHQPSRQR 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0062 484 Gene3D Phosphorylase Kinase; domain 1 134 227 - -
Mibi04g0062 484 FunFam Probable serine/threonine-protein kinase At1g01540 132 227 - -
Mibi04g0062 484 ProSitePatterns Protein kinases ATP-binding region signature. 158 180 IPR017441 GO:0005524
Mibi04g0062 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 274 286 IPR008271 GO:0004672|GO:0006468
Mibi04g0062 484 Pfam Protein kinase domain 155 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0062 484 Gene3D Transferase(Phosphotransferase) domain 1 228 435 - -
Mibi04g0062 484 MobiDBLite consensus disorder prediction 435 484 - -
Mibi04g0062 484 FunFam Putative receptor-like serine/threonine-protein kinase 228 437 - -
Mibi04g0062 484 ProSiteProfiles Protein kinase domain profile. 152 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0062 484 CDD STKc_IRAK 158 424 - -
Mibi04g0062 484 SMART serkin_6 152 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0062 484 SUPERFAMILY Protein kinase-like (PK-like) 130 424 IPR011009 -
Mibi04g0062 484 PANTHER OS01G0323000 PROTEIN 8 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0062 Mibi-ChrMibi04 771659 773750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0062 124 424 Receptor kinase-like Gene Family AT4G02010 47.213 1.98e-94 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Mibi04g0062 Pkinase 3.5e-46 CL0016