Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0059 ATGAACCTTACAAGATGTCCTGATTTCATTCATGCAACAATTCCAGGTATTTCGTTGGCTCAAGCCTATTATTCCAAAGAAGAGGTACAGTTTCCTGAAAATTTTCCCAGGAACAAGTCCAGAAATCTGTCTTCTGAAAACATCAACCTCTTCAATACTACCAAACCCAATAGTGCTTCTTTCTCTCTTAAGTTTTCCACTTCCATTTGTTCCCATAATTCTCTTCCTTCTGCTTCAAGGACAAGCCACTTGTTCAACCATCAATCATATTCACCATCTTTGAGTAACACTGATTTTCCACCTGATAAAATCAGAGATGCTTGGAAGAGTGTTAAAAAAAAGGTTGAAGAAGCCTCCGATGAGTTTGGTGTATGTATTCGGAAGGTGTTTGACTCAAATCCATATCTTTGTAACGTGGTTATTCCAGTAGGTGGTACATTAACAGCCGCTTTAATAGCATGGATTGTGATGCCTCGCATTTTGAGAAAGCTTTACAAATACTCAATGCAAAGTCCTGCTGCAATATTTCTGGACGGCAGCATATCTGGTGAGCAAGTTCCTTATGAGAGAAGCTTTTGGGGTTCTTTGGAGGATCCTGTGCGATATTTGGTCACCTTCATGGCATTCTCACAAATTTGTGTGATGGTAGCTCCAACAACTGTAGCTTCACACCTTGCACAGGCTTGGAGGGGTGCGGTAATACTTTCATTTGTGTGGTTTTTGCATCAGTGGAAAACAAATACATTTGGGCACATTTCTTCTGGTCAAAGTTTTCTCGGTCTTGGTCAAGATAAATTGCTTGCTTTAGACAAAGTTTCATCTGTTGGTCTCTTTGTGATTGGTATAATGGCTTTGGCTGAGGCCTGTGGTGTTGCTGTACAATCTATTGTAACTGTTGGTGGTATAGGAGGAGTTGCCACTGCTTTTGCAACCAAAGACATCCTTGGCAATATATTTAGTGGCCTGTCTATGCAGTTTTCAGAGCCTTTTACAGTTGGGGATATAATAAAAGCTGGCACAGTAGAGGGTGAAGTAGTGGAAATGGGACTTACAACTACATCATTGCTGAATAAGGAGAAGTTCCCAGTTGTAGTGCCAAACTCACTTTTTTCCAGCCAGGTGATAGTGAATGTGTCTCGTGCTGAATATTGCGCCATCACATCTAAAATTCCTTTGAGGATTGGTGATTTGAGTAAAATTCCGAGGATATCAGATGATATAAAGAGCATGCTAAAAACAAAGGAAGTTGTTTTCTTAGGAAAAGAGGCTCCTTACTGTTATCTATCACGCATTGGAAGTTCATTTGCACAATTGACTATTGGATACAACATCAAATACATGGTGCGTACCTCTCTACAACAATTTCATGTCATGTTTAGCAAAGATGAGATGTGTAGTGCAGAACAAGATATACTGATGGAAGTAGTTCAGATTATTAAGAAGCATGGTGGTGAACTTGGCCACCCTTGGCGTCACACGTCTTATAATTCCGAGTAA 1497 0.4015 MNLTRCPDFIHATIPGISLAQAYYSKEEVQFPENFPRNKSRNLSSENINLFNTTKPNSASFSLKFSTSICSHNSLPSASRTSHLFNHQSYSPSLSNTDFPPDKIRDAWKSVKKKVEEASDEFGVCIRKVFDSNPYLCNVVIPVGGTLTAALIAWIVMPRILRKLYKYSMQSPAAIFLDGSISGEQVPYERSFWGSLEDPVRYLVTFMAFSQICVMVAPTTVASHLAQAWRGAVILSFVWFLHQWKTNTFGHISSGQSFLGLGQDKLLALDKVSSVGLFVIGIMALAEACGVAVQSIVTVGGIGGVATAFATKDILGNIFSGLSMQFSEPFTVGDIIKAGTVEGEVVEMGLTTTSLLNKEKFPVVVPNSLFSSQVIVNVSRAEYCAITSKIPLRIGDLSKIPRISDDIKSMLKTKEVVFLGKEAPYCYLSRIGSSFAQLTIGYNIKYMVRTSLQQFHVMFSKDEMCSAEQDILMEVVQIIKKHGGELGHPWRHTSYNSE 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0059 498 SUPERFAMILY Sm-like ribonucleoproteins 313 379 IPR010920 -
Mibi04g0059 498 Gene3D - 329 377 IPR023408 -
Mibi04g0059 498 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 103 492 - -
Mibi04g0059 498 Pfam Mechanosensitive ion channel 271 483 IPR006685 GO:0016020|GO:0055085
Mibi04g0059 498 Gene3D - 225 327 - -
Mibi04g0059 498 SUPERFAMILY Mechanosensitive channel protein MscS (YggB), transmembrane region 227 312 IPR011014 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0059 Mibi-ChrMibi04 743670 746279 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0059 45 494 Mechanosensitive Ion Channel Family AT4G00290 54.286 5.59e-167 479