Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0051 ATGGCAAGGGGGTCGATACCTATTGACGGACTTGTTATAGATTTCGATGAGCCTCCTAGAAAGTTTGAACATGCTACAATCTGTATTGACTTGGAACTATATTCAGAAGAAGCTCAAGGGGCCAAATTTGAGGGAGACCAAGATTACAGAGTCGTTAAAGCTATATCTAATGAGGAACAATGTTCATTTGATCAATTTCTAATTGATTTTTTGAAAGAGAGGAATACCCATGATTCTTTTCGACCTATTCCACCAATGATTGGTGATGGGCAGCCAGTGGATTTGAAAACATTGTTCTTGATTGTCATCGGGAAAGGAGGGTATGATGCAGTCTCCAAAAACTATCTATGGGATTTGGTAGCTGAAAAATCTGGGTTAGGTGTGAACATTGGTTCATCATCAAAGTTGATCTATTGGAAGTATTTAGCCACTTTAGAGATTTGGCTCATAAAAGTTTCTGAGGGCAGAGTGCTTGGTTATAGTTTGATTGATGATGATGGGATCAACTTTGGTAGTCAACTGATGGAACTTCAAGCTGAAATAAAAAGGCTTTTGTCAGATTACATAGCTCCAGATACATCAGGAGATAAATGCAAAGTTCAAGATGGCTTGGATATGCCAAGAAAATTGTACAATATTGATGAAACAATGAAGATGATTGCAAAGAAACTAATAAATGCATTAGATGCAGGAAATTCATCTAATAACAATGAAGAGAACAATGTGACTAGTTTGTCTAATGAAGATGGAGTCAAGGAATTTGATAATGACGACAATGACTTGCTGATATTAGATCCATCCAGTGTTAATAAGGATAACTTTGGGCGTAAGAGGAAAAGAAAGTCGTCTATGCAAGAACTGTTATGTTGGGTAACTAGCATTGCAAAGAATCCATGTGATCCTACGGTTTGTTCAATACTTGACAGATCAAAGTGGAGTTCTCAAAGTAATGAGGAGATCCAGAAGCAAGTTTTGCTGTTCCGAGAGGCTGTCTTGATGAAAAGAAATGTTGAGTCAAGCAAACATCATGACGATTTGGGGGTAATATGA 1050 0.3752 MARGSIPIDGLVIDFDEPPRKFEHATICIDLELYSEEAQGAKFEGDQDYRVVKAISNEEQCSFDQFLIDFLKERNTHDSFRPIPPMIGDGQPVDLKTLFLIVIGKGGYDAVSKNYLWDLVAEKSGLGVNIGSSSKLIYWKYLATLEIWLIKVSEGRVLGYSLIDDDGINFGSQLMELQAEIKRLLSDYIAPDTSGDKCKVQDGLDMPRKLYNIDETMKMIAKKLINALDAGNSSNNNEENNVTSLSNEDGVKEFDNDDNDLLILDPSSVNKDNFGRKRKRKSSMQELLCWVTSIAKNPCDPTVCSILDRSKWSSQSNEEIQKQVLLFREAVLMKRNVESSKHHDDLGVI 349
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0051 349 SUPERFAMILY ARID-like 58 155 IPR036431 GO:0003677
Mibi04g0051 349 CDD ARID 63 146 - -
Mibi04g0051 349 Pfam ARID/BRIGHT DNA binding domain 63 146 IPR001606 GO:0003677
Mibi04g0051 349 ProSiteProfiles ARID domain profile. 57 150 IPR001606 GO:0003677
Mibi04g0051 349 Gene3D - 44 156 IPR036431 GO:0003677
Mibi04g0051 349 SMART bright_3 58 151 IPR001606 GO:0003677
Mibi04g0051 349 SMART ARID_2 54 146 - -
Mibi04g0051 349 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 55 341 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi04g0051 Mibi-ChrMibi04 670789 671838 Transposed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mibi04g0051 ARID 6.8e-10 CL0123