Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0025 ATGGATCGAGGGGACCATATGGCGTTATCTGGGTCTGCACCATACTATATGCAGAGAGGGCTAGCTGGTGCTGGAGCACAGCCTGAGTTACATGGTTCCCCTGGCATTCGTCCCCTGTCCAATCCCAATCTGCCATTTCAACCTGGCATTGGAGGCCCCATTGGATCCTCATTATCAGTAGAATCATCAGCAATTTCACCTCATGGTGTCAATGTGGGTGCTCCTCCCGGTGCGCCGCCTCCGGGAGAACCTGTCAAAAGGAAGAGAGGAAGGCCTAGGAAGTATGGTCCAGATGGAAGTGTATCATTGGCCTTGACTCCATCACCATCCTCTGCTCATCCCACTGGGGGAGCATTGACACAAAGCCAGAAGCGAGGTAGAGGCCGTCCTCCGGGATCTGGAAAGAAGCAGCAGCTGGCATCTCTTGGTGAATTGATATCTGGTTCAGCAGGGATGGGCTTCACTCCTCATATCATCACCATTGCAGTTGGAGAAGACATTGCAACAAAAATAATGGCATTTTCTCAACAAGGACCAAGAGCTGTATGCATTTTGTCAGCAAACGGTGCTGTCTCTAATGTGACGCTTCGACAGCCTTCAAGTTCGGGTGGCACTGTCACATATGAGGGGCGTTTTGAGATACTGTGCCTATCAGGCTCTTATTTGCTCACTGAAAGTGGTGGCTCCCGCAATCGAACTGGTGGTCTCAGTGTTTCACTAGCTAGTCCTGATGGCCGTGTCATTGGTGGTGGGGTTGGTGGATTACTGATCGCTGCAAGTCCTGTTCAGGTGATAGTTGGGAGCTTCATATGGGGAGGATCAAAGACAAAGAGCAAGAAAAAGGATGTCGCAGAAGAAGCTGAAGTAGCAATGGAATCAGATCACCCCCACCACCACCACCACCACCACCAAGCGGTCCACAATCCGCCTGCATTGAGCAGCATTTCACCGAATCAAAATCTCACCCAAGCGTCATCTATGAGTTCCTGGCCTGCTGCTTCTCGTCAATTGGACATGCGTAATTCCCATGTTGACATTGATTTAATGCGTGGGTGA 1056 0.5066 MDRGDHMALSGSAPYYMQRGLAGAGAQPELHGSPGIRPLSNPNLPFQPGIGGPIGSSLSVESSAISPHGVNVGAPPGAPPPGEPVKRKRGRPRKYGPDGSVSLALTPSPSSAHPTGGALTQSQKRGRGRPPGSGKKQQLASLGELISGSAGMGFTPHIITIAVGEDIATKIMAFSQQGPRAVCILSANGAVSNVTLRQPSSSGGTVTYEGRFEILCLSGSYLLTESGGSRNRTGGLSVSLASPDGRVIGGGVGGLLIAASPVQVIVGSFIWGGSKTKSKKKDVAEEAEVAMESDHPHHHHHHHQAVHNPPALSSISPNQNLTQASSMSSWPAASRQLDMRNSHVDIDLMRG 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0025 351 MobiDBLite consensus disorder prediction 280 295 - -
Mibi04g0025 351 Gene3D - 156 300 - -
Mibi04g0025 351 FunFam AT-hook motif nuclear-localized protein 1-like 156 287 - -
Mibi04g0025 351 MobiDBLite consensus disorder prediction 309 336 - -
Mibi04g0025 351 MobiDBLite consensus disorder prediction 280 336 - -
Mibi04g0025 351 MobiDBLite consensus disorder prediction 103 122 - -
Mibi04g0025 351 Pfam Plants and Prokaryotes Conserved (PCC) domain 156 269 IPR005175 -
Mibi04g0025 351 MobiDBLite consensus disorder prediction 25 139 - -
Mibi04g0025 351 CDD DUF296 155 269 IPR005175 -
Mibi04g0025 351 SMART AT_hook_2 124 136 IPR017956 GO:0003677
Mibi04g0025 351 SMART AT_hook_2 86 98 IPR017956 GO:0003677
Mibi04g0025 351 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 71 328 IPR039605 GO:0003680
Mibi04g0025 351 SUPERFAMILY AF0104/ALDC/Ptd012-like 154 271 - -
Mibi04g0025 351 ProSiteProfiles PPC domain profile profile. 150 290 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0025 Mibi-ChrMibi04 407739 411317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0025 1 351 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 50.681 1.78e-91 276