Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi04g0016 | ATGGGAAGAACACCCTGCTGCGACAAGAAGGGCCTGAAGAAAGGGCCCTGGACTACCGAAGAAGATGAGCTCCTAGTTAATTACATCAAGAAGAACGGTGGCCATGGAAGCTGGCGTTCTCTCCCTAAGCTGGCAGGTCTGGTGCGGTGCGGGAAGAGCTGCAGGCTAAGGTGGACCAACTATCTGAGGCCAGACATCAAACGAGGGCCCTTCAGTGCGGAGGAAGAGAAGCTGGTGATACAGCTGCATGCCATCCTGGGCAACAGGTGGGCGGCGATAGCGTCGCAGATAGAGGGAAGGACGGACAATGAGATAAAGAATCTGTGGAACACCCACCTGAAGAAGAGGCTCCTCTGCATGGGACTGGACCCTCTCACCCACAAGCCCCTCTCTTCCTCTGCCTCTGCCTCTTCATCCTCATCCTCTCCTTCCTCCTCCACCTCCTCTGATGTCTGCACTCGCCACATGGCACAGTGGGAGAGTGCCAGGCTGGAGGCGGAGGCACGCCTCTCCAGAGACAGACACACTCACTCCTCCTCCTCAGACATGTTCCTCCGCCTCTGGAACTCCGAGGTGGGCCTCTCCTTCCGCACCCTCCACCACTCCTCCTCCAACGGCTTCACTGCCTCCCCTCCCCCTCCTCCTCCACCTCCACCTCCTCCTCCTCCCTTCATGGATGACGACACTACTGCCTTCCACCTCCTTCTCGACTTCCCCATTTACGATGACATCACCACCTTCTTGCAACCCCCCTCCCCCTCCCCCTCCATTTCTCCCCTTTAG | 783 | 0.5837 | MGRTPCCDKKGLKKGPWTTEEDELLVNYIKKNGGHGSWRSLPKLAGLVRCGKSCRLRWTNYLRPDIKRGPFSAEEEKLVIQLHAILGNRWAAIASQIEGRTDNEIKNLWNTHLKKRLLCMGLDPLTHKPLSSSASASSSSSSPSSSTSSDVCTRHMAQWESARLEAEARLSRDRHTHSSSSDMFLRLWNSEVGLSFRTLHHSSSNGFTASPPPPPPPPPPPPPFMDDDTTAFHLLLDFPIYDDITTFLQPPSPSPSISPL | 260 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi04g0016 | 260 | MobiDBLite | consensus disorder prediction | 130 | 152 | - | - | |
| Mibi04g0016 | 260 | MobiDBLite | consensus disorder prediction | 208 | 226 | - | - | |
| Mibi04g0016 | 260 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 9 | 62 | IPR017930 | - | |
| Mibi04g0016 | 260 | Gene3D | - | 70 | 117 | - | - | |
| Mibi04g0016 | 260 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 1 | 177 | - | - | |
| Mibi04g0016 | 260 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 63 | 117 | IPR017930 | - | |
| Mibi04g0016 | 260 | MobiDBLite | consensus disorder prediction | 203 | 228 | - | - | |
| Mibi04g0016 | 260 | CDD | SANT | 16 | 62 | IPR001005 | - | |
| Mibi04g0016 | 260 | Pfam | Myb-like DNA-binding domain | 14 | 62 | IPR001005 | - | |
| Mibi04g0016 | 260 | Pfam | Myb-like DNA-binding domain | 68 | 113 | IPR001005 | - | |
| Mibi04g0016 | 260 | ProSiteProfiles | Myb-like domain profile. | 63 | 113 | IPR001005 | - | |
| Mibi04g0016 | 260 | SUPERFAMILY | Homeodomain-like | 11 | 109 | IPR009057 | - | |
| Mibi04g0016 | 260 | CDD | SANT | 70 | 113 | IPR001005 | - | |
| Mibi04g0016 | 260 | FunFam | Transcription factor RAX3 | 7 | 68 | - | - | |
| Mibi04g0016 | 260 | ProSiteProfiles | Myb-like domain profile. | 9 | 62 | IPR001005 | - | |
| Mibi04g0016 | 260 | SMART | sant | 67 | 115 | IPR001005 | - | |
| Mibi04g0016 | 260 | SMART | sant | 13 | 64 | IPR001005 | - | |
| Mibi04g0016 | 260 | Gene3D | - | 11 | 68 | - | - | |
| Mibi04g0016 | 260 | FunFam | MYB transcription factor | 69 | 130 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi04g0016 | Mibi-ChrMibi04 | 296107 | 297416 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi04g0016 | 1 | 259 | MYB Transcription Factor Family | AT3G61250 | 58.249 | 6.86e-108 | 312 |
Transcription factors information