Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0009 ATGGATATGGCTTGTAGCTTTCCGCAGTCAAGAATATTAGATGGAGGGATCGGTTACAAACAAAAGTATAATCTCGGTTCTTGCATGACATTCAGAAGATGTTTTGGTTGTGCCTTCCTTGGCGACTCCACTACTATTCTCAAAGCTCGGTTTAGTGGGATAAACAAGGTTAGTGGTGCTGCTTTTCGCAGTGCCAGATTGGTTTCCGTGGGACAGCTCAAAGTTACAAATTTGAAGAGAACCTGGTCTACTAAGAAAGGTGATATTTTCACGGGATCCAAAGCAATTTGGGTAAGATGTCAGGGTAATGATTCTTTGGCTTATGTTAACGGTAATGGTCGTAATGTCGATTATGTGAAGGGTTCCGGTGAGGAATTGGGATTAGGGCCTACTTCTGGTGCTGAACTGTCTGTATCAGTGGAAGAGGAAGAAGGGGGGCATGGAGTAGAAGAAGACACGCACAGTGTGGATGAATTGAAAGAATTATTGCAAAAGGCCTTGAAGGATTTAGAAGTTGCAAGAGTAAATAGTGCCATGTTCGAGGAGAAGGTTAAAAAAATTTCAGAGACTGCAATATCTTTGCAGGATGAAGCATCAAATGCTTTACACAACGTTGATATTACTCTTGATGCCATCCAAGACACTGAGACTGAAGAATGTACGGCTAAAGAAGCAGTTCAAAAGGCAACGATGGCTCTTTCGTTGGCTGAGGCGAGGCTACAAGTGGCCATAGAATCTTTGGAGGTTGCAAAAGAAGAGCATGATTCTCCACAAGGTTCTGATGGGGACAATGACATAACAGAGGAGGAGAAGGCACTTTTGGTTGCTCAGGAAGATGTCAAGGAATGCCAGACAAATTTAACAAATTGTGAAGCATCACTGAGACACTGGCAGAATAGAAAGGAGGAATTGCAGAAGGAAGTGGAGAAGTTGAACGAACTTGCTGAAAAGGCACAGTTGAATGCATCAAAAGCAGAGGAGGATGTCACAAATATAATGCTTTTAGCAGAACAAGCTGTTGCCTTTGAACTTGAGGCTACACAGCGAGTAAATGATGCTGAGATAGCGTTACACCGAGCTGAAAAATCCATTTCAAGTACCAATGCTGATGCCACAGAAACTAAACAAGTACAAGATTCTGAGGGTGTTTCTGAGGAGGAGAAATCAGTTCAGGATTTTTCTGCTGATTTCATTACTGAAGTGGGTGGAGATTTGCCAATTGGTGATGAATCCTTGCTTCAGAAGGAATCATCAGAAGCAATAATTGATAAAAGCAGCCAAAGTTTGATGGAGCCAACTTACTCTGGTTACCTGAGTGATCATGAGACTGGGCAGTTAGACTCTTCTGTGGAAGCTGAAGCAGAATTAGAGAAATTGAAGAATCCTGTTCCGACAAAAAAACAGGAGACACAGAAAGATTTTACTAGAGATAGCTCACCCTTTGCTCCCAAAGGATTATTGAAGAAGTCATCACGTTTCTTTTCTGCATCATTCTTCTCTTTTTCAGAAGATGGAACTGAGTTCACGCCAGCATCAGTTTTCCAAGGTTTTGTTGAATCTGTACAGAAGCAGTTACCTAAGGTGGTTCTTGGGTTATTGTTAATGGGAGCAGGGGTTGTCTTTTATGCTAATCGAGGAGAGAGAAGCTCTCAGCTATTTCAGCAGCCAGAAGTCATTGCAAGTGGTGTTGAAGAAGTTTCCTCAAGTGCTAAGCCTTTGGTCAGCCAACTTCGGAAACTTCCTAACAGAATTAAGAAAATTATTGCATCATTACCTCAACAAGAGGTTAATGAGGAGGAAGCCTCTCTCCTGGACATGCTTTGGTTATTGCTGGCTAGTGTTATATTTGTGCCTATATTTCAAAAGATTCCTGGAGGAAGTCCTGTTCTTGGTTACTTGGCTGCTGGTATCTTGATTGGGCCTTATGGTCTCTCCATCATCCGTCACGTTCATGGAACAAAAGCAATAGCTGAATTTGGAGTTGTTTTCTTATTATTCAATATTGGCCTTGAGCTCTCTGTTGAAAGGCTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCTGCTCAGGTGTTGGTGACTGCTGTAGCAGTTGGCTTGGTGGCTCATTATGTTTGTGGTATACCTGGCCCTGCTTCAATTGTTATTGGCAACGGACTGGCATTATCTTCCACTGCGGTTGTCCTGCAAGTATTGCAGGAGAGAGGTGAGAGCACATCACGGCATGGTCGAGCTACTTTTTCTGTTTTACTTTTTCAGGATTTGGCTGTTGTGGTCTTGCTAATACTCATCCCTCTTATTTCACCAAATTCTTCCAAAGGAGGGATTGGTTTCCAAGCTATTGCTGAAGCTCTTGGATTGGCTGCTGTTAAGGCAGCAGTTGCCATTACTGCCATAATTGCTGGTGGACGATTGCTCCTTCGACCAATATATAAGCAGATTGCTGAAAATCAGAATGCAGAAATATTTTCAGCCAATACACTCCTTGTTATTCTTGGGACTAGTCTTCTTACTGCTAGGGCAGGGCTTTCCATGGCACTTGGGGCATTTTTGGCTGGTTTACTTCTTGCAGAAACTGAATTTTCCTTACAAGTTGAATCTGATATTGCTCCATATCGTGGTCTTCTATTGGGGCTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTCCTTGTGTCAAACTTTCCGGTCATTACAGGGACACTTGGACTCTTAATTTTTGGCAAGACTATGTTGGTTTCTTTGATTGGAAAAAGCTTTGGGATTTCGCTCATTTCTGCCATTAGAGTTGGTCTCCTTCTTGCTCCTGGAGGGGAATTTGCATTTGTGGCTTTTGGCGAAGCTGTTAATCAGGGCATAATGTCTTCCCAACTCTCATCTTTGCTATTTCTTGTTGTGGGAATCTCTATGGCTCTCACACCATGGTTAGCTGCAGGCGGCCAGCTTATTGCTTCCCGTTTTGAACTTCATGATGTTCGTAGCTTATTACCTGTAGAAAGTGAGACGGATGATTTGCAAGATCACATCATTATATGTGGATTTGGACGAGTTGGTCAGATCATTGCTCAACTTCTTTCTGAGCGACTTATCCCTTTCGTTGCTCTAGACGTTAGAAGTGATAGAGTGGCTGTTGGTCGTGCTTTGGATCTGCCTGTATACTTTGGAGATGCTGGTAGTCGTGAGGTCCTACACAAGATTGGGGCTGAAAGAGCATGTGCAGCAGCAGTAACTCTTGATTCTCCTGGTGCAAATTATCGAACAGTTTGGGCTCTGAGCAAGTACTTCCCAAATGTGAAGACTTTTGTTCGAGCTCATGATGTTGATCATGGCCTGAATTTAGAAAAGGCTGGAGCTACTGCTGTTGTACCGGAGACCCTGGAACCAAGTCTTCAACTTGCAGCTGCTGTACTTGCTCAGGCTAAACTTCCCACGTCAGAGATTACATCAGCTATAAATGAATTCAGATCCCGGCATCTGTCTGAGCTTACTGAGCTGTGTGAAGCAAGTGGCAGTTCTCTTGGTTATGGATTTAACCGAATTGCGAGCAAATCCAAATCTCAATCCTCAGACTCATTGGATGATAACCAAATCTCTGAAGGAACACTGGCAATATGA 3624 0.4288 MDMACSFPQSRILDGGIGYKQKYNLGSCMTFRRCFGCAFLGDSTTILKARFSGINKVSGAAFRSARLVSVGQLKVTNLKRTWSTKKGDIFTGSKAIWVRCQGNDSLAYVNGNGRNVDYVKGSGEELGLGPTSGAELSVSVEEEEGGHGVEEDTHSVDELKELLQKALKDLEVARVNSAMFEEKVKKISETAISLQDEASNALHNVDITLDAIQDTETEECTAKEAVQKATMALSLAEARLQVAIESLEVAKEEHDSPQGSDGDNDITEEEKALLVAQEDVKECQTNLTNCEASLRHWQNRKEELQKEVEKLNELAEKAQLNASKAEEDVTNIMLLAEQAVAFELEATQRVNDAEIALHRAEKSISSTNADATETKQVQDSEGVSEEEKSVQDFSADFITEVGGDLPIGDESLLQKESSEAIIDKSSQSLMEPTYSGYLSDHETGQLDSSVEAEAELEKLKNPVPTKKQETQKDFTRDSSPFAPKGLLKKSSRFFSASFFSFSEDGTEFTPASVFQGFVESVQKQLPKVVLGLLLMGAGVVFYANRGERSSQLFQQPEVIASGVEEVSSSAKPLVSQLRKLPNRIKKIIASLPQQEVNEEEASLLDMLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVAVGLVAHYVCGIPGPASIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGIGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQIAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFPVITGTLGLLIFGKTMLVSLIGKSFGISLISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMALTPWLAAGGQLIASRFELHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKIGAERACAAAVTLDSPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEITSAINEFRSRHLSELTELCEASGSSLGYGFNRIASKSKSQSSDSLDDNQISEGTLAI 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0009 1207 ProSiteProfiles RCK N-terminal domain profile. 1011 1133 IPR003148 GO:0006813
Mibi04g0009 1207 Pfam TrkA-N domain 1012 1125 IPR003148 GO:0006813
Mibi04g0009 1207 MobiDBLite consensus disorder prediction 366 390 - -
Mibi04g0009 1207 FunFam K(+) efflux antiporter 2 chloroplastic 1007 1171 - -
Mibi04g0009 1207 Coils Coil 149 176 - -
Mibi04g0009 1207 TIGRFAM 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 610 890 IPR004771 GO:0006812|GO:0008324|GO:0016020
Mibi04g0009 1207 Gene3D - 1007 1171 - -
Mibi04g0009 1207 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 190 1198 - -
Mibi04g0009 1207 Pfam Sodium/hydrogen exchanger family 609 979 IPR006153 GO:0006812|GO:0015299|GO:0016020|GO:0055085
Mibi04g0009 1207 Coils Coil 287 328 - -
Mibi04g0009 1207 Coils Coil 233 253 - -
Mibi04g0009 1207 MobiDBLite consensus disorder prediction 1188 1207 - -
Mibi04g0009 1207 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1008 1149 IPR036291 -
Mibi04g0009 1207 FunFam K(+) efflux antiporter 2 chloroplastic 599 985 - -
Mibi04g0009 1207 Gene3D - 599 985 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0009 Mibi-ChrMibi04 256627 274056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0009 100 1207 Inorganic Solute Cotransporters AT4G00630 70.671 0.0 1430