Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2295 ATGGCGAAATTCTCCGTGGGTGGGGACGACGATGGGGAGGGGCCCAGCAACCCGACCCAAAAGCGACGCAGGGTTGCTGTTAGTCATGGCACCATCGGGAATTGCTCTGGAGAAGACGAAATAGAAGATACTGTGCAGGAACTAGAACTGTTACAAAGTGAAGAAGAAGATCCATGTAACGATGATTCTGGCAATTGCTTTGGAGCTAGGTCAGGCGATAGCAGTGAAGACAACAATGTTTCAGCGCCTCAAAATAGGGACAGGTCCATATTTTTCACCCTTAGCGACCCTGATGTGTTCGATTGCTTCATCTGCTATGAACCCTTGAGCATCCCTGTCTTCCAGTGTGAGAATGGACATATTGCTTGCTCTTCCTGTTGTGCTAAACTTGGGAACAAGTGTCCCATATGTTCTATGCCCATTGGCTATAACCGTTGCCGAGCCATTGAGAAGGTGCTGGAATGTGTTCAGATATCCTGCCTAAATGCGCAATATGGTTGTAAAGAAATAATAACTTACAGTAAGAAAAATGACCATGAAAAGCAGTGCATTTATGCACCGTGTTCATGCCCGCAATCAGGTTGCAACTTTGTTGCCCCGTCTAAGGAGTTGTCACACCACTTTCTCCTTAAACATGGGGTTTCTGCGATAAATTTTACCTATAATTGCTTCTTCTCTATCTTCCTAAGGGTCAATGATGATGTTATTGTTCTTCAAGAACAGAATGGTGCCGATCTATTTATGCTCAAGAATAAAGTTGTGCAATTGGGGAATATGGTCAATGTCGGTTGCATTTGTCCCAATTTATTCGAAAAGGCATGCCATTATGATATTTTCGCCAGATCCCAGGGATGCTGCCTGAAAATACATTGTTTAGTGGAGAACGTTCATGGTCGCCAGGCCAACAACACTGCCCCAACAAGGTTTCTTTTAATCCCATCTGGTTTTTTTGGTTCTTCTGGACAGCTCAAACTGGAGATTCGCATTAAGTGTAATAATACTCATCTTGCAGATGTGCAGAGATCCTAG 1029 0.4412 MAKFSVGGDDDGEGPSNPTQKRRRVAVSHGTIGNCSGEDEIEDTVQELELLQSEEEDPCNDDSGNCFGARSGDSSEDNNVSAPQNRDRSIFFTLSDPDVFDCFICYEPLSIPVFQCENGHIACSSCCAKLGNKCPICSMPIGYNRCRAIEKVLECVQISCLNAQYGCKEIITYSKKNDHEKQCIYAPCSCPQSGCNFVAPSKELSHHFLLKHGVSAINFTYNCFFSIFLRVNDDVIVLQEQNGADLFMLKNKVVQLGNMVNVGCICPNLFEKACHYDIFARSQGCCLKIHCLVENVHGRQANNTAPTRFLLIPSGFFGSSGQLKLEIRIKCNNTHLADVQRS 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2295 342 MobiDBLite consensus disorder prediction 1 40 - -
Mibi03g2295 342 ProSiteProfiles Zinc finger RING-type profile. 102 138 IPR001841 -
Mibi03g2295 342 Pfam Seven in absentia protein family 145 218 IPR018121 GO:0005737|GO:0006511|GO:0007275
Mibi03g2295 342 ProSiteProfiles Zinc finger SIAH-type profile. 155 213 IPR013010 GO:0008270
Mibi03g2295 342 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 65 331 IPR044286 -
Mibi03g2295 342 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 150 208 IPR013083 -
Mibi03g2295 342 SUPERFAMILY TRAF domain-like 156 329 - -
Mibi03g2295 342 SUPERFAMILY RING/U-box 98 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2295 Mibi-ChrMibi03 59378956 59388038 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g2295 98 214 C3H Transcription Factor Family AT2G41980 35.294 1.17e-18 83.6