Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2260 ATGCTGGTCTCTACTTCAGTTCCGGAATTTCACAAGCTTCGCCGATTTCTCCCTTTTGCTTCCAAATTGGCATTACGTCATTCATTGGAGAAAATGAAGCTCTTTAGGCTTTTGATTTTATCCTTATCTTTCTTCTCTGTCATGGGACAGCTTCCTTCTCAGGACATCTTAGCATTGTTGGAATTTAAGAAAGGTATCAAACATGACCCGACTGGTTATGTCCTCAATTCCTGGAATGAAGAATCCATTGACTTCAATGGATGCCCATCTTCATGGAATGGAGTTCTGTGTAATGCTGGTAATGTGGCTGGGGTTGTGCTAGACAATCTGGGTCTCTCTGCTGAGGCAGACTTGAGTGTTTTTTCAAACCTCACAAAGCTTGTCAGGCTCTCCTTGTCCAACAATTCCATATCAGGAAGGCTCCCTGATAACATAGGAGATTTCAAAAGTCTTCAATTCCTAGATGTCTCCAATAACCTTTTCTCTTCATCCCTACCACAGGGAATTGGTAAGCTAGCTAGCTTACAGAACTTGTCATTGGCAGGGAATAATTTCTCTGGCTCAATTCCTGTCTCAATTGCAGGGATGTCATCAATCCAATCTTTGGACTTGAGCCGTAACTCCTTTTCTGGAGCAATGCCAGCTTCTTTGACTAAGCTGAATGGCATGGTATCTCTCAATTTGTCTCATAACAGCTTCACTGGAAAAATTCCCAAAGGTTTTGATCTGATGTCTGCTCTTGATAAGGTTGACTTGCATGGAAATATGCTTGATGGTCAGTTAGATATTAAATTTATGCTTTTTACAAGTGCCAGTTATGTTGATTTTAGTGATAATATGTTAGTGAGTTCTAACTCCCCGCAGCAGAGGTTTCTGCCCCGAATCTCTGAAAGTATCAAGTACTTGAATTTAAGCCACAACCAGCTGATTGGATTGTTGGATGGTGAAGGCGAACTTACACCATTTGAAGACCTGAAGGTGTTGGATCTTAGCTACAATCAATTGTCTGGAGAACTGCCTGAATTTGAATTTGTCTATGATCTCCAGGTCCTTAGGCTTAGCAACAACAGATTTTCAGGATTTCTTCCAAATGGCCTGCTCAAGGGAGACCCTTTGGTCATAACCGAACTCGATTTGAGTGCCAACAATCTCTCAGGACCGATAGGATTAATCACATCAACAACACTGCGCTATCTGAATCTCTCATCAAATGGTTTCACTGGTGAACTGCCACTTTTAACAGGGAGCTGTGCGGTTCTTGATCTTTCAAAGAACAAGCTAGAAGGAAATCTATCCAGGATGGTAAAATGGGGAAATATAGAATTTCTTGATCTCAGTATAAATCGTTTGACAGGACCCATTCCTGAGGAAACTCCTCAATTTTTACGATTGAATTATCTGAATTTCTCCCATAATTCTCTTAGCAGCTTCCTCCCTAGTGTCTTAAAGCAGTATCCAAAGCTAAGAGTGCTTGATGTTAGTTCCAACCAGTTAGATGGACAGCTTCCCGATAAGCTGCTTGATATGCCTACTTTGCAAGAGCTTCATCTAGAAAATAATCTCATTACAGGCGGCATCAACATATCATCTGCCCCTGGTCAATCTGATCTTCAGGTTCTTGATCTTTCTCACAACCAATTTAATGGGTACTTTCCTGAAAATTTTGGATCACTAACGGGCTTGAAAGTGCTCAATATTGCTGGAAATAATTTTTCTGGTTCTCTTCCAACTTCCATTGATATCAGTTCCTTAGATTCGTTAGATATATCAGAGAATCATTTTACAGGTCCGTTACCAACTGACCTGCCAAAGGGACTGAAAAACTTTAATGCTTCATACAATAATCTGTCTGGTATTGTCCCAGAAAATCTTAGGAAGTTCCCTAGTTCTTCTTTCTTTCCTGGGAATGTTAAGTTGCGATATCCAAATGGTCCTCCTGGATCAACCAATGTGCCTGCTGAAGGCTCAAGGAAGAAGCCTATGAGCACTATCATTAAAGTAATAATTATAGTGTCATGTGTGGTTGCACTATTCATTGTAATCCTGCTTGCAATCTTCATACATTACATATGTATATCATCAAGATCTCCGCCAGAACATGCTGCTGGTAAGGACATACATGGGCATGCTCAACCAAACTTACCTGGCATAGGCCGTACTGCAGACAGGGGCGGTGCTTTGGTTGTATCAGCTGAGGATCTTGTGACCTCAAGGAAAGGATCATCTTCAGAGATAATCAGCCCAGATGAAAAATTGGCAGCTGCAACTACAATGTCCCCATCGAAAAACAGCCACTTTTCCTGGTCACCAGGGTCTGGTGATTCATTTACTGCTGAAAATTTTGCAAGACTTGATGTGAGATCACCTGATAAGTTAATTGGCGAGCTGCATTTTCTTGATGATGCAATAACATTGACCCCTGAGGAGCTTTCAAGGGCCCCTGCTGAAGTTTTGGGGAGAAGCAGTCATGGAACTTCTTATAAGGCTACTCTGGAGAATGGCTTGTTACTGAGAGTGAAGTGGTTGAGAGAAGGAGTGGCTAAACAGAGGAAAGAGTTTGCTAAAGAGGCTAAAAAGTTTTCAAACATCAGGCATCCAAACGTTGTAGGATTGAGAGGTTATTATTGGGGTCCTACACAGCATGAGAAGCTTATTCTTTCCGACTTCATTTCTCCTGGAAGTCTTGCAATTTTTCTTTATGATCGACCAGGAAGAAAGGGTCCCCCATTAACCTGGGCCCAGAGGCTCAAAATAGCAGTTGATGTGGCACGTGGCCTTAACTATCTCCACTTTGACCGTGCTGTTCCTCATGGGAACCTTAAAGCAACAAATGTGCTGTTAGATACTCCAGATTTGATTGCAAGAGTTGCTGATTATTGCCTCCATCGGCTTATGACACAGGCCGGTACTACTGAACAGATTCTTGATGCTGGGGTTTTGGGATATCGTGCACCAGAGTTAGCTGCTTCCAAGAAGCCAACCCCCTCCTTTAAATCAGATGTTTATGCTTTTGGAGTGATACTCTTGGAACTTTTAACTGGAAGGTGTGCTGGTGATGTGATATCAGGAGATGATGGAGGTGTTGATATGACTGATTGGGTAAGGTTGCGTGTGGCTGAAGGCAGAGGATCAGAATGTTTTGATGCTGCTTTGATGCCAGAAATGGGGAATCCAATTGCTGAAAAGGGAATGAAGGATTTCCTAGGAATAGCTCTGCGATGCATTCGGTCTGTTTCTGAGAGGCCAGGTATCAAGACTATTTATGAAGACCTTTCATCTATATAG 3285 0.421 MLVSTSVPEFHKLRRFLPFASKLALRHSLEKMKLFRLLILSLSFFSVMGQLPSQDILALLEFKKGIKHDPTGYVLNSWNEESIDFNGCPSSWNGVLCNAGNVAGVVLDNLGLSAEADLSVFSNLTKLVRLSLSNNSISGRLPDNIGDFKSLQFLDVSNNLFSSSLPQGIGKLASLQNLSLAGNNFSGSIPVSIAGMSSIQSLDLSRNSFSGAMPASLTKLNGMVSLNLSHNSFTGKIPKGFDLMSALDKVDLHGNMLDGQLDIKFMLFTSASYVDFSDNMLVSSNSPQQRFLPRISESIKYLNLSHNQLIGLLDGEGELTPFEDLKVLDLSYNQLSGELPEFEFVYDLQVLRLSNNRFSGFLPNGLLKGDPLVITELDLSANNLSGPIGLITSTTLRYLNLSSNGFTGELPLLTGSCAVLDLSKNKLEGNLSRMVKWGNIEFLDLSINRLTGPIPEETPQFLRLNYLNFSHNSLSSFLPSVLKQYPKLRVLDVSSNQLDGQLPDKLLDMPTLQELHLENNLITGGINISSAPGQSDLQVLDLSHNQFNGYFPENFGSLTGLKVLNIAGNNFSGSLPTSIDISSLDSLDISENHFTGPLPTDLPKGLKNFNASYNNLSGIVPENLRKFPSSSFFPGNVKLRYPNGPPGSTNVPAEGSRKKPMSTIIKVIIIVSCVVALFIVILLAIFIHYICISSRSPPEHAAGKDIHGHAQPNLPGIGRTADRGGALVVSAEDLVTSRKGSSSEIISPDEKLAAATTMSPSKNSHFSWSPGSGDSFTAENFARLDVRSPDKLIGELHFLDDAITLTPEELSRAPAEVLGRSSHGTSYKATLENGLLLRVKWLREGVAKQRKEFAKEAKKFSNIRHPNVVGLRGYYWGPTQHEKLILSDFISPGSLAIFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTPDLIARVADYCLHRLMTQAGTTEQILDAGVLGYRAPELAASKKPTPSFKSDVYAFGVILLELLTGRCAGDVISGDDGGVDMTDWVRLRVAEGRGSECFDAALMPEMGNPIAEKGMKDFLGIALRCIRSVSERPGIKTIYEDLSSI 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2260 1094 Pfam Leucine Rich repeat 393 409 IPR001611 GO:0005515
Mibi03g2260 1094 FunFam Pollen receptor-like kinase 1 890 1094 - -
Mibi03g2260 1094 ProSiteProfiles Leucine-rich repeat profile. 324 346 IPR001611 GO:0005515
Mibi03g2260 1094 Gene3D Ribonuclease Inhibitor 220 286 IPR032675 -
Mibi03g2260 1094 SMART LRR_typ_2 148 172 IPR003591 -
Mibi03g2260 1094 SMART LRR_typ_2 485 509 IPR003591 -
Mibi03g2260 1094 SMART LRR_typ_2 461 484 IPR003591 -
Mibi03g2260 1094 SMART LRR_typ_2 124 147 IPR003591 -
Mibi03g2260 1094 SMART LRR_typ_2 196 219 IPR003591 -
Mibi03g2260 1094 SMART LRR_typ_2 345 369 IPR003591 -
Mibi03g2260 1094 ProSiteProfiles Protein kinase domain profile. 812 1094 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g2260 1094 Gene3D Ribonuclease Inhibitor 287 650 IPR032675 -
Mibi03g2260 1094 PANTHER OS07G0626500 PROTEIN 38 1094 - -
Mibi03g2260 1094 SUPERFAMILY RNI-like 129 616 - -
Mibi03g2260 1094 SUPERFAMILY Protein kinase-like (PK-like) 815 1091 IPR011009 -
Mibi03g2260 1094 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 413 643 - -
Mibi03g2260 1094 Pfam Leucine rich repeat N-terminal domain 53 98 IPR013210 -
Mibi03g2260 1094 Pfam Leucine rich repeat 510 571 IPR001611 GO:0005515
Mibi03g2260 1094 Pfam Leucine rich repeat 199 257 IPR001611 GO:0005515
Mibi03g2260 1094 Pfam Protein tyrosine and serine/threonine kinase 816 1013 IPR001245 GO:0004672|GO:0006468
Mibi03g2260 1094 FunFam LRR receptor-like serine/threonine-protein kinase GHR1 51 296 - -
Mibi03g2260 1094 Gene3D Phosphorylase Kinase; domain 1 805 889 - -
Mibi03g2260 1094 Gene3D Transferase(Phosphotransferase) domain 1 891 1094 - -
Mibi03g2260 1094 Gene3D Ribonuclease Inhibitor 52 218 IPR032675 -
Mibi03g2260 1094 FunFam Leucine-rich repeat receptor-like protein kinase 797 889 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2260 Mibi-ChrMibi03 59019986 59024641 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g2260 55 1042 Receptor kinase-like Gene Family AT4G36180 28.011 2.41e-81 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi03g2260 PK_Tyr_Ser-Thr 4.2e-28 CL0016