Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2258 ATGGCCATGATTGGGGGGGAGGGACTGTTTCTTGTGCTGAATCTAGCGATAATTTCAGTGATTTTAGCTTCTGGGAAAGCTCAATCAAAGTCAATTTTTATTAATTGTGGTTCTAATTCTTCTGTAATTGCTGATGGTAGAACATGGATTGGGGATATGGCCTCTAATAATAATAATATCACCCTTAGCTCTCCTGGTATTGCTGCTTCTGTCTCTATGTTAAGTGGCAATTCGTCCTTTGATCCTCTCTACAAAACCGCCAGGATTTTCACGGGTGCTTCCAATTACACAATTAAAGGCGTTCCAGGAAATCATGTTGTTAGGCTCCATTTCTGCCCCTTTGTGTTTGAGGACTACAATGTAAATGAGTCCTCATTTGATGTTGTGGCCAATGGTCTGAAACTATTGACGGAGTTCAATATTCCTGGAGAGATATCACACAGAAATACATACTTGCAGAATTCAGGCGGCAATTCGACTTCATATTTCTTGATCAAAGAATATATTCTTGCTGTCAATTCAGGTGTGCTTGTAATTGAACTCATCCCAACAAAAAGCTCATTTGGCCTTATCAATGCCATTGAGATTGTCCAAGTTCCAGATGAGCTTTTTGCAGGCTCTGTCAATAAAGTTGGTGGAAGTGATGCAAGTCTGAATTTGACTGGACGTGGGATGGAGACCATGTACAGGTTGAATGTCGGCGGTCCCAAAATCACTTCCAAAGAGGATAAAGATATTTGGAGAACTTGGGATGTGGATTCTGGCTACATGATCATAGAAAGTGCTGGGTCAGGAATAAATAACAAGTCTAATATAACATATGCTTCGATGAATGATTCTTCAGTGGCCCCTCTCGTTGTGTATGAGACTGCAAGGGCAATGTTTGACACTCAAGTCTCAGAGAAAAGGTTTAACATGTCATGGAAGTTTGAGGTGGACCCTGATTTTGAGTATATTATCCGATTACATTTCTGTGAGCTGGAATATGACAAGGCAAATGAGAGAATTTTCAGGATCTATATAAACAACAAGACAGCAGCAGATAATGTTGATATTTATGTACGAGCAGGAGGGATGAATAAAGCGTATCACCAGGATTATGTAGATGGTGTGTCCTCAAGAATCAACACACTATGGGTTCAGTTAGGTCCTGATTCAGCTGCTGGTGCTGCTGGAACTGACGCTCTTTTAAATGGGCTAGAAATTTTCAAGATTAGTCGAAATGGGAATTTGGCCTATGTAGAGAGATATGATTCAGGGGGCAATTCAGCTAGCAAATCAAGAAAACGGATTCTCTGGATGGGAATTGGAGCAGGTCTAACTTCTGTTGCCGTAATTATATTAATAGCTGCTCTGTTTTTCTGGTTTAGGAAAAGAAGCAGGAAAGCAACAAGTGATACCAAAAGCAATGCTCCTGGTTGGCGGCCATTGTTTCTTCATGGTGCTACTGCAAACAGCACTGTTAGTGCCAAGGGATCAGCAGGACTTCAGAATCCATATGGATCAGTGGCACCAACCCGACTTGGAAAACGGTTTACGCTAGCGGAAATCCGTGCTGCAACAAGAAATTTTGATGAGAGCTTGATAATTGGAGTAGGAGGCTTTGGTAAGGTGTACAAGGGAGAGATTGACGATGGGGTTCTTGCTGCTATTAAGCGAGCCAATCCACAGTCTGAGCAGGGTTTGGCTGAATTTGAGACAGAGATCGAGATGCTTTCCAAACTGAGGCATAAGCATCTGGTGTCCCTAATTGGATTCTGTGAAGAGCAAAATGAAATGATCTTGGTTTATGAATACATGGCAAATGGTACCCTCAGGAGTCATCTATTTGGGAGCGATCTCTCACCGTTAACTTGGAAGCAGCGCCTAGAAGTGTGCATAGGTGCCGCAAGAGGGCTCCATTATTTGCATACCGGTGCAGAGCGTGGAATAATCCACAGGGATGTCAAGACAACCAATATATTGTTAGATGAGAACTTTGTGGCTAAAATGTCTGACTTTGGTTTGTCAAAAGATGGTCCTGCTTTGGACCATACTCATGTCAGTACAGCTGTGAAAGGAAGTTTTGGTTACCTAGACCCTGAGTACTTCAGACGACAGCAGCTAACTGAGAAATCAGACGTGTACTCTTTTGGTGTCGTGTTGTTTGAAGTTATCTGTGCCAGAGCTGTGATAAATCCTACATTACCTAAAGATCAAATCAATCTTGCAGAATGGGCAATGAGGTGGCAGAGGCAGAGGTCACTTGAAACTATCATCGATCCGCACCTTGCAGGAGGCTATCATCCTGAGTCCTTGTCTAAGTATGGAGAGATAGCAGAAAAATGTCTTGCTGATGAGGGGAAAAATAGGCCCACAATGGGGGAGGTGTTGTGGCACTTGGAGTATGTTCTTCAGCTTCATGAAGCTTGGTTGAACACTAGCAGCAGAGACGCTTCATTTTCTAGCAGTCAAGCTTTAAGAGGAGTGAAAGAGGAAGAACCAGAAGACATACATACAGGAGCCATTGAACAGAGTAGTTGA 2523 0.4265 MAMIGGEGLFLVLNLAIISVILASGKAQSKSIFINCGSNSSVIADGRTWIGDMASNNNNITLSSPGIAASVSMLSGNSSFDPLYKTARIFTGASNYTIKGVPGNHVVRLHFCPFVFEDYNVNESSFDVVANGLKLLTEFNIPGEISHRNTYLQNSGGNSTSYFLIKEYILAVNSGVLVIELIPTKSSFGLINAIEIVQVPDELFAGSVNKVGGSDASLNLTGRGMETMYRLNVGGPKITSKEDKDIWRTWDVDSGYMIIESAGSGINNKSNITYASMNDSSVAPLVVYETARAMFDTQVSEKRFNMSWKFEVDPDFEYIIRLHFCELEYDKANERIFRIYINNKTAADNVDIYVRAGGMNKAYHQDYVDGVSSRINTLWVQLGPDSAAGAAGTDALLNGLEIFKISRNGNLAYVERYDSGGNSASKSRKRILWMGIGAGLTSVAVIILIAALFFWFRKRSRKATSDTKSNAPGWRPLFLHGATANSTVSAKGSAGLQNPYGSVAPTRLGKRFTLAEIRAATRNFDESLIIGVGGFGKVYKGEIDDGVLAAIKRANPQSEQGLAEFETEIEMLSKLRHKHLVSLIGFCEEQNEMILVYEYMANGTLRSHLFGSDLSPLTWKQRLEVCIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKDGPALDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVICARAVINPTLPKDQINLAEWAMRWQRQRSLETIIDPHLAGGYHPESLSKYGEIAEKCLADEGKNRPTMGEVLWHLEYVLQLHEAWLNTSSRDASFSSSQALRGVKEEEPEDIHTGAIEQSS 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2258 840 PANTHER OS07G0166700 PROTEIN 510 801 IPR045272 GO:0004714|GO:0006468
Mibi03g2258 840 ProSiteProfiles Protein kinase domain profile. 524 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g2258 840 CDD STKc_IRAK 530 795 - -
Mibi03g2258 840 SMART serkin_6 524 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g2258 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Mibi03g2258 840 Pfam Protein tyrosine and serine/threonine kinase 530 791 IPR001245 GO:0004672|GO:0006468
Mibi03g2258 840 Pfam Malectin-like domain 34 405 IPR024788 -
Mibi03g2258 840 ProSitePatterns Protein kinases ATP-binding region signature. 530 552 IPR017441 GO:0005524
Mibi03g2258 840 FunFam receptor-like protein kinase FERONIA 489 599 - -
Mibi03g2258 840 Gene3D Transferase(Phosphotransferase) domain 1 600 818 - -
Mibi03g2258 840 Gene3D Phosphorylase Kinase; domain 1 497 599 - -
Mibi03g2258 840 MobiDBLite consensus disorder prediction 816 840 - -
Mibi03g2258 840 FunFam Receptor-like protein kinase FERONIA 600 814 - -
Mibi03g2258 840 Gene3D - 28 200 - -
Mibi03g2258 840 Gene3D - 224 407 - -
Mibi03g2258 840 FunFam Receptor-like protein kinase FERONIA 224 407 - -
Mibi03g2258 840 SUPERFAMILY Protein kinase-like (PK-like) 501 796 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2258 Mibi-ChrMibi03 58994199 58996721 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g2258 11 829 Receptor kinase-like Gene Family AT1G30570 64.146 0.0 1103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mibi03g2258 Malectin_like 9.5e-35 CL0202