Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2245 ATGCACAAAGACTCACCCGGCAAGCAGATGGACTCTAGCAAGTATGTGAGATATACTCCTGAGCAGGTGGAGGCTTTGGAAAGGGTGTATGCAGAATGCCCAAAACCCAGTTCTTTGAGGAGACAACAGCTCATTAGGGAGTGTCCTATACTGTCTAATATTGAACCCAAACAGATCAAAGTTTGGTTTCAGAACCGCAGATGTCGTGAAAAGCAGAGGAAGGAATCTTCACGGCTGCAGACGGTAAATAGGAAGCTCACTGCAATGAACAAGCTATTAATGGAAGAGAATGATCGACTGCAGAAACAGGTGTCACAGTTGGTCTACCAAAATGGATGCATGAAGCAACAGATACATACTGTATCTGCTACTACTACAGACAATAGCTGTGAGTCTGTGGTAATGAGTGGTCAACAACAACAGCAAAACCCAACACCTCAGCATCCTCAGAGGGATGCCAATAACCCAGCTGGTCTTCTGGCGATAGCTGAGGAGACCCTGGCAGAGTTCCTTTCCAAGGCTACTGGAACTGCTGTCGACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGAATCGTAGCTGTTTCCCGCAATTGTAGTGGAATAGCAGCACGAGCTTGTGGCCTCGTGAGCCTGGAGCCCACGAAGGTTGCTGATATTCTTAAAGATCGTCCATCTTGGTATCATGATTGCCGCTGCCTTGATGTGTTGAACATAGTCCCCACTGGGAGTGGAGGAACAATTGAACTCTTGTACATGCAGACTTATGCGCCCACAACACTGGCAGCAGCACGTGACTTTTGGACTCTTAGATTCACAACAACTATGGAAGATGGAAGTCTTGTGGTATGTGAGAGGTCGTTGACTTCTTCAACTGGTGGTCCCACGGGTCCTCCTTCATCAAACTTTGTTAGAGCTGAAGTGCTTCCTAGTGGCTATCTAATTAGACCCTGTGAGGGTGGTGGATCCATTATTCACATTGTTGATCATGTGGATTTAGACGCTTGGAGTGTTCCTGAAGTGCTCAGGCCCCTTTACGAGTCATCCAAAATCCTTGCTCAGAAAATGACTATTGCCGCCTTGCGACATATAAGGCAGATTGCTCAAGAAACAAGTGGAGAAATCCAATATGGTGGCGGTCGGCAGCCTGCTGTTCTAAGAACATTCAGTCAGAGACTTAGCAGGGGCTTCAATGATGCTGTGAATGGGTTTGTGGATGATGGCTGGTCCCTAATGGGTAGTGATGGTGCTGAGGATGTGACCATAGCTATTAACTCATCTCCAAATAAGTTTTTTGGGTCCCACTATGGCACCTCGATGTTCCCTGCATTTGGAGGTGGTGTGTTATGTGCCAAGGCATCAATGTTGCTGCAGAATGTTCCTCCTGCTTTGCTTGTTCGCTTCCTGAGGGAGCATCGCTCAGAATGGGCTGATTATGGGGTTGATGCATACTCTGCTGCGTGTCTCAAGGCTAGTCCTTATGCAATTCCTTGTGCAAGGCCTGGTGGCTTTCCCAGCAGTCAGGTCATTTTACCACTGGCTCATACTATTGAACATGAGGAGTTCTTGGAGGTAGTTCGTATAGAAGGTCATGCATTTTCCCCTGAAGATGTGGCTCTTGCCCGAGATATGTATCTTCTGCAGCTATGTAATGGAATTGATGAGAATGCAATTGGATCGTGTGCTCAACTTGTGTTTGCACCTATTGATGAATCATTTGCTGATGATGCTGTTTTGCTTCCCTCTGGCTTCCGGGTCATACCATTGGATCCTAAAACAAATGGTTCAGCGGCAAACAGAACTTTGGATCTGGCATCTACACTTGAAGCTGGATCTGGAAGTGGCCGGGCAACCGGTGACACTGATCCCAACAATTACAATCTCAGGTCGGTCCTTACTATTGCGTTCCAATTTATGTTTGAGAACCATATGCGGGACAATGTGGCTGCTATGGCCCGCCAGTATGTGCGAAGTGTTGTGGGGTCTGTACAGAGAGTTGCCATGGCTATCGCTCCCTCTCGCCTAAGTACTCAGCTTGGGCCAAAGTCGCTTCCTGGTTCGCCAGAGGCTCTTACTTTAGCAAGATGGATCTGCAGAAGCTACAGAATTCACACTGGGGGTGAGATTTTTAATGTTGAGTCCATGGCAACTGATGCAATCTTGAAACAACTTTGGCACCATTCAGACGCGATCATGTGCTGCTCTGTAAAAGCAAATGCATCCCCTGTTTTCACCTTTGCAAACCAGGCTGGCCTTGACATGCTTGAAACCACTCTTGTGGCCCTTCAAGATATAATGCTTGATAAAGTGCTTGATGAAGCCGGCAGGAAGATTCTCTGCTCCGAGTTTGCCAAGATAATGCAGCAGGGGTTTGCGTATCTGCCAGCAGGAATATGTGTATCGAGCATGAACAGGCCTGTATCGTATGAGCAGGCTATAGCCTGGAAAGTTCTGAATGATGATGATTCCAATCACTGCCTTGCCTTCATGTTCATGAACTGGAACATGCTCATAATTCTTATCCGTTACAGTGCAGAGATCAAAGTGATTCCTTTGTTGAACGATACCATTGTGATTCCCTTGTTTAATGAGATACCCTTGAAGTCTAGTAGTATGAATGCTCTCAAGAAGTTGTAG 2649 0.4685 MHKDSPGKQMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYQNGCMKQQIHTVSATTTDNSCESVVMSGQQQQQNPTPQHPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGIAARACGLVSLEPTKVADILKDRPSWYHDCRCLDVLNIVPTGSGGTIELLYMQTYAPTTLAAARDFWTLRFTTTMEDGSLVVCERSLTSSTGGPTGPPSSNFVRAEVLPSGYLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQKMTIAALRHIRQIAQETSGEIQYGGGRQPAVLRTFSQRLSRGFNDAVNGFVDDGWSLMGSDGAEDVTIAINSSPNKFFGSHYGTSMFPAFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAACLKASPYAIPCARPGGFPSSQVILPLAHTIEHEEFLEVVRIEGHAFSPEDVALARDMYLLQLCNGIDENAIGSCAQLVFAPIDESFADDAVLLPSGFRVIPLDPKTNGSAANRTLDLASTLEAGSGSGRATGDTDPNNYNLRSVLTIAFQFMFENHMRDNVAAMARQYVRSVVGSVQRVAMAIAPSRLSTQLGPKSLPGSPEALTLARWICRSYRIHTGGEIFNVESMATDAILKQLWHHSDAIMCCSVKANASPVFTFANQAGLDMLETTLVALQDIMLDKVLDEAGRKILCSEFAKIMQQGFAYLPAGICVSSMNRPVSYEQAIAWKVLNDDDSNHCLAFMFMNWNMLIILIRYSAEIKVIPLLNDTIVIPLFNEIPLKSSSMNALKKL 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2245 882 Pfam MEKHLA domain 696 839 IPR013978 -
Mibi03g2245 882 SUPERFAMILY Bet v1-like 409 596 - -
Mibi03g2245 882 Pfam START domain 162 369 IPR002913 GO:0008289
Mibi03g2245 882 ProSiteProfiles 'Homeobox' domain profile. 9 73 IPR001356 GO:0003677
Mibi03g2245 882 SMART HOX_1 11 77 IPR001356 GO:0003677
Mibi03g2245 882 FunFam Homeobox-leucine zipper protein REVOLUTA 14 69 - -
Mibi03g2245 882 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 10 840 IPR044830 GO:0003700
Mibi03g2245 882 FunFam homeobox-leucine zipper protein ATHB-15 197 378 - -
Mibi03g2245 882 CDD homeodomain 14 74 IPR001356 GO:0003677
Mibi03g2245 882 SUPERFAMILY Homeodomain-like 14 75 IPR009057 -
Mibi03g2245 882 CDD bZIP 66 105 - -
Mibi03g2245 882 Gene3D - 182 375 IPR023393 -
Mibi03g2245 882 MobiDBLite consensus disorder prediction 132 154 - -
Mibi03g2245 882 SUPERFAMILY Bet v1-like 162 373 - -
Mibi03g2245 882 Coils Coil 83 110 - -
Mibi03g2245 882 Pfam Homeodomain 14 72 IPR001356 GO:0003677
Mibi03g2245 882 CDD START_ArGLABRA2_like 156 372 - -
Mibi03g2245 882 Gene3D - 7 80 - -
Mibi03g2245 882 MobiDBLite consensus disorder prediction 132 152 - -
Mibi03g2245 882 ProSiteProfiles START domain profile. 152 380 IPR002913 GO:0008289
Mibi03g2245 882 SMART START_1 161 371 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2245 Mibi-ChrMibi03 58846763 58853686 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g2245 1 841 Homeobox Transcription Factor Family AT2G34710 79.527 0.0 1406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi03g2245 START 4.6e-52 CL0209