Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2235 ATGAAGGAGGGAGGGAGGAAGCAGGGTTCAGCTTCACCTTGTGCGGCATGCAAGCTTCTTCGAAGAAGATGTGCTAACGACTGTGTCTTCGCCCCTTATTTTCCCGCCGATGAGCCCCACAAATTCGCTAATGTTCACAAAGTCTTCGGAGCTAGTAATGTCAACAAGATGCTTCAGGAGCTACCAGTGCATCAAAGAGGGGATGCAGTGAGCAGTATGGTGTATGAGGCAAATGCAAGAGTGAGAGATCCAGTGTATGGGTGTGTTGGGGCCATCTCTTCTCTTCAGCAACAGATTGACATGCTTCAGACCCAATTGGCCTTGGCCCAGGCTGAGGTGGTCCATCTTAGGGTTAGCCAGTCTGCTTCCCTTTCCAACCATGGGCTCAGCCCAACTAGCAGCGACTCGCCGCCACATTCAAAATCCATACTCGACATGGACTTTATGATGGATCACTCCACTTATTCTGATTCAATGTGGCCCTGCTACAGCAAGCATTTACCTTGGAATATACACATCAAAGCACAAAGATATGACAGCATGAATCTAAACTTATCATAG 561 0.4831 MKEGGRKQGSASPCAACKLLRRRCANDCVFAPYFPADEPHKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDMLQTQLALAQAEVVHLRVSQSASLSNHGLSPTSSDSPPHSKSILDMDFMMDHSTYSDSMWPCYSKHLPWNIHIKAQRYDSMNLNLS 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2235 186 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Mibi03g2235 186 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 133 - -
Mibi03g2235 186 Coils Coil 92 112 - -
Mibi03g2235 186 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2235 Mibi-ChrMibi03 58744792 58747603 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g2235 1 162 AS2 family AT1G31320 71.512 7.16e-78 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mibi03g2235 LOB 1.4e-43 No_clan