Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2233 ATGGAGAGGGTGGGTAGGCTCATGGCAGCTACAGGGGAGGCCCAAGAGGCAGCTCTGGTGGAAGAGGCCCCCTTCGTCAACAACCACACTCTTACAATGTTGATCGTTATGGCGGAGGCAGAGGTAGAAGAGGTCGAGGAAATTGCAGGGGTGGTGTTTGGCCGCCCAGTGAATCGCTTCAACCTCACAATTCTGCCCCGTGTGCAGTTCCTTTGCCAGAAGAAACTTTCAGTCACCATCTCAGCAGGAGAAGATGATAGAAACTATTCATATAAAGTCACCTTAACTCTAGTTAATAGGCTTGAGTACCGCAAGTTGAGCCAGTACCTCAATAAAGAGCTTATGTCAGTTCCCAGAGATATAATGCAAGGGATGGATATAGTGTTCAAGGAAAATCCAGCCAAGCGTACAATCTCTGGTTTCTCCTTATGTCTGGACTACTCTGTTTTATCTTTCCGAAAGCGAATGTCAGTCTTGGATTTTCTATATGAGCGTATTTCTGGTTTTAGATTGGAGCAATTTGGACTTTATAGGTGTGACGTTGAGGGGGAATTGATTGGTTTAAAGGTACACCGTAGAACCAGACAGAAATACTCCATTTTGGGGCATATCACCTTTCCTCTTAAGGACCCAGATGGCCGGAACGACCCACAAGAAATTTCAATTATTGACCATTTCTTGGATAAATACGGTAAGGATATTGAATACAAAGATATTCCTTGTTTAGTTTTTGGGAAAGGTCTCTTAGTGCCAATGGAGTTTTGCATCTTAGTGGAGGGTCAGAGATATCCCAAAGAGTATTTGGACAGAGATGCTTCGAAGGCCTTGAAAGATATGTCATTGGCCTCTCCGAAAATGAGACACAGTGTTATACAAACAATGGTGCAATCAAGTGACGGACCTTGCGGTGGTGGTATTATTCGAAACTTTGGAATGGAAGTGAACACAACAATGACTACCGTTTCAGGACGCATTATTGAGCCACCGAAATTGAAAGTAGGTGGTCGAGATGGCCGGATTATGACTATAACATTGGACTCGGAGAGATGTCAATGGAATCTAGTTGGAAAATCTGTGATGCAAGGAAAATATCATAATCTTACAAATCTTGCTCTCAGGATCAATGCCAAACTTGGAGGTAGTAATGTTGAGCTTGATAATAGGCTCCATTGCTTTGCAGGTGATAATAATAGGCAAGTTATGTTTATAGGGGCAGATGTGAATCATCTTGCTGCTCGAGACATTAATAAGGAGCCTTCTGTTGGAAATGTGTCTCCCGGAACTGTGGTGGACACAAAAGTGGTACACTCATTTAAGTTTGATTTCTACCTTTGCAGTCACTATGGAATCTTAGGAACCAGCAAGCCTACTCATTATCATGTCTTGTGGGATGAACACAGATTTACCTCTGATGACTTACAAAAACTCATATATGATATGTGTTTTACCTTTGCTAAGTGCACTAAACCTGTATCTTTGGTCCCTCCTGTGTACTATGCCGATCTTGTTGCCTATCGAGGACGGCTGTACTATGAAACAAAGACAAAGTTGGAGAGCTCGAAGAAGCCGGCATTGTGTTCTTCTTCATCAGCAAATGAACACAAGTATTTCAAGCTGCATGAGCACTTGGAAGATGTGATGTTCTTTGTCTAA 1653 0.4271 MERVGRLMAATGEAQEAALVEEAPFVNNHTLTMLIVMAEAEVEEVEEIAGVVFGRPVNRFNLTILPRVQFLCQKKLSVTISAGEDDRNYSYKVTLTLVNRLEYRKLSQYLNKELMSVPRDIMQGMDIVFKENPAKRTISGFSLCLDYSVLSFRKRMSVLDFLYERISGFRLEQFGLYRCDVEGELIGLKVHRRTRQKYSILGHITFPLKDPDGRNDPQEISIIDHFLDKYGKDIEYKDIPCLVFGKGLLVPMEFCILVEGQRYPKEYLDRDASKALKDMSLASPKMRHSVIQTMVQSSDGPCGGGIIRNFGMEVNTTMTTVSGRIIEPPKLKVGGRDGRIMTITLDSERCQWNLVGKSVMQGKYHNLTNLALRINAKLGGSNVELDNRLHCFAGDNNRQVMFIGADVNHLAARDINKEPSVGNVSPGTVVDTKVVHSFKFDFYLCSHYGILGTSKPTHYHVLWDEHRFTSDDLQKLIYDMCFTFAKCTKPVSLVPPVYYADLVAYRGRLYYETKTKLESSKKPALCSSSSANEHKYFKLHEHLEDVMFFV 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2233 550 Gene3D - 414 550 IPR036397 GO:0003676
Mibi03g2233 550 SUPERFAMILY Ribonuclease H-like 416 512 IPR012337 -
Mibi03g2233 550 ProSiteProfiles Piwi domain profile. 392 512 IPR003165 GO:0003676
Mibi03g2233 550 SMART Piwi_a_2 252 512 IPR003165 GO:0003676
Mibi03g2233 550 Pfam PAZ domain 181 272 IPR003100 GO:0005515
Mibi03g2233 550 SUPERFAMILY PAZ domain 152 297 IPR036085 GO:0005515
Mibi03g2233 550 Gene3D paz domain 151 263 - -
Mibi03g2233 550 ProSiteProfiles PAZ domain profile. 205 259 IPR003100 GO:0005515
Mibi03g2233 550 Pfam Piwi domain 421 511 IPR003165 GO:0003676
Mibi03g2233 550 CDD PAZ_argonaute_like 156 258 - -
Mibi03g2233 550 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 366 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2233 Mibi-ChrMibi03 58716364 58720966 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g2233 413 512 Eukaryotic Initiation Factors Gene Family AT5G43810 60.000 7.09e-37 144