Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2230 ATGTCAATCCATGGGCGAGATATTGTTGCCCTAGACGCAGGTCCAAATGTAAGGCCGAGATCTCGATTTTCAAAACGATCTAACGGCCATCGTCCATTTTCATACTCCCTTATATACGCTCCACCCCATGCTTCCTCATTAGCTTACCGCCACCATCGCAGTCGCACCCTGCATCCTCCTCCTTCCTCCTTCAGTTTCTGCGACTTGCGATCTTTGCCCGAGAGATCAACAATGGTAATCTCCGTTCTGCAGAACGATATCGATTTGCTCAATCCTCCGGCCGAGATCGAAAAGAGGAAGCACAAGCTTAAGCGTCTCGTTCAGTCTCCGAACTCGTTCTTCATGGACGTCAAATGTCAAGGTTGCTTCAACATAACCACTGTATTTAGCCACTCCCAAACAGTTGTTGTCTGTGGGAATTGCCAGACCGTATTGTGCCAGCCAACCGGTGGCCGAGCTCGGCTAACAGAAGGATGCTCTTTCAGGAAGAAGGGAGATTAG 501 0.495 MSIHGRDIVALDAGPNVRPRSRFSKRSNGHRPFSYSLIYAPPHASSLAYRHHRSRTLHPPPSSFSFCDLRSLPERSTMVISVLQNDIDLLNPPAEIEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2230 166 Hamap 30S ribosomal protein S27e [rps27e]. 104 164 IPR000592 GO:0003735|GO:0005840|GO:0006412
Mibi03g2230 166 ProSitePatterns Ribosomal protein S27e signature. 118 150 IPR000592 GO:0003735|GO:0005840|GO:0006412
Mibi03g2230 166 FunFam 40S ribosomal protein S27 80 166 - -
Mibi03g2230 166 PANTHER 40S RIBOSOMAL PROTEIN S27 76 166 IPR000592 GO:0003735|GO:0005840|GO:0006412
Mibi03g2230 166 Gene3D - 85 165 IPR023407 -
Mibi03g2230 166 SUPERFAMILY Zn-binding ribosomal proteins 110 164 IPR011332 GO:0006412
Mibi03g2230 166 Pfam Ribosomal protein S27 110 164 IPR000592 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2230 Mibi-ChrMibi03 58698958 58699924 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g2230 82 166 Cytoplasmic Ribosomal Protein Gene Family AT3G61110 94.118 2.33e-58 175