Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2223 ATGGACAGACGCGAATACAGTCATGGCGGCTACAGGGGAGGCCAAAGAGGCCGTGGAAGAAGACAACCCTATAATGACGATGATGATCATTCTGCTTCTGGAGGAAGAGGCCAAAGAGGAAGGCACAATGTTGATGGTTCCCGAGTGTCATCTGGTGGACATGCTCATGGCGGGAGATCTTGGGCGGACATGCTGAAGAAATCCCCTCAATCTGCTGTTTCTGCTCCACACCCAGTTCCTGAATCGGAACGACATCAAGTTTCTCGACCGGTTCCAAGCTGTCAAAATGAGGAGATGGAAGGTAGGCTTTTGCCCGTCCCTAGGCCTGCTGACAAGGGTCATTTGTCAGCAACAAGTAGCCGCCTCCGAGTGAACCACTTTCCTGTAGATTTTTCGCGTGATTGTGAAATCATGCATTACAATGTTGTTGTGGAGCGCTACCCAAAAGCCGATCCTGGTACCGATCAACCTCATAGTATACCAAATTCTATCCTCTCTAAGGTTAGGCGTGCATTCTTTGCAAAGTACCCGTTGCCAGATGGGACGACAGCGTATGATGGAGGAAATATCGTTTACAGTCTAGAAACTTTGACGCTACGACCTTTCCATGTGACTATCCCGGCAGGAAATGAGGGTAAACAAGATTCATATAGCGTCAGCTTAGAATATGTGCATACTCTTGAGTACGGGAAGTTGAGGGAATTCCTCAGTAATAAGGAGGGGCCTATGTCAGCTCCCGAAGACGTTTTGCAAGCCATGCGTTTAGTATTCAAGAAAAGTCAAACCTCTCTTTCTGTTGGACGTGGCTTCTATAATCTAAAGGCTCCTTCAGAAGAGAATGATCTTCGCCGTGGCTTAATTGCACTCGAGGGGTTCCGACAAAGTTTGAAGCCAACATATCAAGGGTTGTCGCTATGCCTGGACTACTCCGTCTTACCTTTTGCAAAGCCAATCGAAGTCTTTGATTTTTTACTTGAGAATATTTCTGGTTATCATGGCCCTCAGGATTTTCAACGTTGCAGGAAACCCATTGAGGATAAATTGATTGGTTTAAAGGTAGAGGTGACATACCGTAGTCCCAGACAGAAATACACGATTGTAGGGTTATCAGAGAAAAACACAAAGGATATCACCTTTCCCAGAAAACGGTCGAATGGCTCCCAGGAAACCTCAATTACTGATTATTTCTATGACAAATACAAACGGCATATTAAATGCCAAGACATTCCCTGTTTGGATTTTGGGAACTGTGTCTTTGTGCCAATTGAGCTCTGCAAGTTAATAGAGGCTCAGAGATACCCCAACAAGAAGATGGATACAGTTGCTTCCAAAAACTTGAAAAATAAGTCAGTGATCCACCCAGCAAAGAGACATGGACGCATTATTCCGCCACCAGATTTGAAAGCACGCGATCAAAAAGGCGAAAAGAAAACTCTGGATATGAAGAACCATCGATGGGGACTAAGTGGAAGCCATGTGATGGAAGGTAAGCTGGTCAGGTGTTGGGGCTTAATTGATTTTACAAGCAAAGAGGAAAATGATTTCAAATTAAATTGCAAGGCATTCATTGATAATCTCACGGGAAAATTTAGAAGATTGGGCATTGGCATGAATGAACCTCTTTTTATTAGACCATCTTCGACGGATGTACTTGCAAGTCATGATTTGCTGGAAAGTTTACTTAGAGAAGTGAAAGAGGTAAAGGGCAAGAATCATCAAGTAGCACAATTTATTCTGTGTGTCATGCCTCGGAGACATGATGGTTACAAGACGCTGAAGTGGATTTCAGAAACCAAGGTTGGTGTAGTAACACAGTGCTGTTTAGTTCAAACTGTGAATTATGGGAAAGATCAGAATTTCACAAATCTCGCGCTAAAGATCAACGCGAAACTTGGAGGAAGTAACGTTGAGCTTGAAAAGGGGCTCAGTCATTACTTTGCTTGTGATAGGGAGCATGTAATGGTCGTTGGTGCTGATGTTAATCACCCCGGGGCTGGAGACAGCAGCAGTGCATCCATTTCTGCCGTGGTAGGCACAATGAACTGGCCAGCAGCGAATTGTTACGCTGCACGTGTCAGCCATCAGAGACATCGTGTGGAAAGAATACTGAATTTCGGAAGAGTTTGTCTGGATCTCGCTGACTGCTACAAAAGGTTCAATGGGAGGAGACCAGATAAAATCATTATTTTCCGTGATGGGGTCAGTTCTGGTCAGTTTGACATGGTTCTCAATGAAGAACTGCGAGATCTGAAAACTGTTTTCAAGAAGGTAGGATATAATCCAAGTATAACTTTGATTGTAGCCCAGAAGAGGCACCTTACAAGGTTTTTTGTAGAGGGTGGTAGTCGTACAGCAGTCCAGAATGTGCATCCTGGCACAGTGGTGGACTCTGTGGTGGTTCACCCTTTTGAGTTTGACTTCTATCTGTGCAGCCACCATGGAAACTTAGGGACCAGCAAGCCAACACACTACCATGTGCTCTGGGATGAACACCACTTTACATCTGCTGAAATTCAGAGTCTCATTTATGATATGTGCTACACCTTTGTCAGGTGCACAAGCCCCATATCTCTTGTCCCTCCGGTGTACTATGCAGATCTTGTAGCATCTCGGGGACGTCACTATTATGATTCAAAGGTCAAGTTCGAAGGTCCTCCACCTGTTCAGCAAGGTCCTCCACCTGTTCGAAAGTCTAATAAAACGTGTTGGTCGAGTGCTGAGTACTCTGAGCTAAGTGAGAGACACTTTAGACCTGAACTTTGTAATCTCTCTCTCTCTCGCCCAAAATGTAATGTCTCTTTTTCAAAGTATACTGTGTTTACCTGA 2826 0.4459 MDRREYSHGGYRGGQRGRGRRQPYNDDDDHSASGGRGQRGRHNVDGSRVSSGGHAHGGRSWADMLKKSPQSAVSAPHPVPESERHQVSRPVPSCQNEEMEGRLLPVPRPADKGHLSATSSRLRVNHFPVDFSRDCEIMHYNVVVERYPKADPGTDQPHSIPNSILSKVRRAFFAKYPLPDGTTAYDGGNIVYSLETLTLRPFHVTIPAGNEGKQDSYSVSLEYVHTLEYGKLREFLSNKEGPMSAPEDVLQAMRLVFKKSQTSLSVGRGFYNLKAPSEENDLRRGLIALEGFRQSLKPTYQGLSLCLDYSVLPFAKPIEVFDFLLENISGYHGPQDFQRCRKPIEDKLIGLKVEVTYRSPRQKYTIVGLSEKNTKDITFPRKRSNGSQETSITDYFYDKYKRHIKCQDIPCLDFGNCVFVPIELCKLIEAQRYPNKKMDTVASKNLKNKSVIHPAKRHGRIIPPPDLKARDQKGEKKTLDMKNHRWGLSGSHVMEGKLVRCWGLIDFTSKEENDFKLNCKAFIDNLTGKFRRLGIGMNEPLFIRPSSTDVLASHDLLESLLREVKEVKGKNHQVAQFILCVMPRRHDGYKTLKWISETKVGVVTQCCLVQTVNYGKDQNFTNLALKINAKLGGSNVELEKGLSHYFACDREHVMVVGADVNHPGAGDSSSASISAVVGTMNWPAANCYAARVSHQRHRVERILNFGRVCLDLADCYKRFNGRRPDKIIIFRDGVSSGQFDMVLNEELRDLKTVFKKVGYNPSITLIVAQKRHLTRFFVEGGSRTAVQNVHPGTVVDSVVVHPFEFDFYLCSHHGNLGTSKPTHYHVLWDEHHFTSAEIQSLIYDMCYTFVRCTSPISLVPPVYYADLVASRGRHYYDSKVKFEGPPPVQQGPPPVRKSNKTCWSSAEYSELSERHFRPELCNLSLSRPKCNVSFSKYTVFT 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2223 941 Gene3D - 647 910 IPR036397 GO:0003676
Mibi03g2223 941 CDD Piwi_ago-like 453 876 IPR045246 -
Mibi03g2223 941 SUPERFAMILY Ribonuclease H-like 558 877 IPR012337 -
Mibi03g2223 941 Pfam Argonaute linker 1 domain 265 314 IPR014811 -
Mibi03g2223 941 Pfam N-terminal domain of argonaute 121 253 IPR032474 -
Mibi03g2223 941 Pfam PAZ domain 338 443 IPR003100 GO:0005515
Mibi03g2223 941 SUPERFAMILY PAZ domain 314 461 IPR036085 GO:0005515
Mibi03g2223 941 SMART Piwi_a_2 577 877 IPR003165 GO:0003676
Mibi03g2223 941 SMART DUF1785_2 264 317 IPR014811 -
Mibi03g2223 941 CDD PAZ_argonaute_like 317 428 - -
Mibi03g2223 941 SMART PAZ_2_a_3 322 451 IPR003100 GO:0005515
Mibi03g2223 941 ProSiteProfiles Piwi domain profile. 577 877 IPR003165 GO:0003676
Mibi03g2223 941 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 120 878 - -
Mibi03g2223 941 MobiDBLite consensus disorder prediction 19 36 - -
Mibi03g2223 941 Pfam Piwi domain 577 876 IPR003165 GO:0003676
Mibi03g2223 941 Gene3D paz domain 313 433 - -
Mibi03g2223 941 ProSiteProfiles PAZ domain profile. 347 429 IPR003100 GO:0005515
Mibi03g2223 941 Gene3D - 461 640 - -
Mibi03g2223 941 MobiDBLite consensus disorder prediction 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2223 Mibi-ChrMibi03 58644946 58651260 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g2223 86 884 Eukaryotic Initiation Factors Gene Family AT1G48410 31.719 7.69e-118 384